WormBase Tree Display for Gene: WBGene00006481
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| WBGene00006481 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | plrg-1 | Person_evidence | WBPerson4055 | |||||
| Sequence_name | D1054.15 | ||||||||
| Molecular_name | D1054.15a | ||||||||
| D1054.15a.1 | |||||||||
| CE05533 | |||||||||
| D1054.15b | |||||||||
| CE45329 | |||||||||
| D1054.15a.2 | |||||||||
| D1054.15b.1 | |||||||||
| Other_name | phi-13 | Person_evidence | WBPerson2582 | ||||||
| tag-135 | Person_evidence | WBPerson201 | |||||||
| CELE_D1054.15 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | plrg-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-13 | ||||
| 3 | 13 Apr 2012 16:12:45 | WBPerson2970 | Name_change | CGC_name | plrg-1 | ||||
| Other_name | tag-135 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | plrg | ||||||||
| Allele (25) | |||||||||
| Strain | WBStrain00002405 | ||||||||
| WBStrain00001578 | |||||||||
| WBStrain00035807 | |||||||||
| WBStrain00034965 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00012282 | ||||||||
| 00012283 | |||||||||
| 00012284 | |||||||||
| 00114131 | |||||||||
| Contained_in_operon | CEOP5264 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of Prp19 complex and catalytic step 2 spliceosome. Expressed in head and tail. Is an ortholog of human PLRG1 (pleiotropic regulator 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1054.15a | |||||||
| D1054.15b | |||||||||
| Corresponding_transcript | D1054.15a.1 | ||||||||
| D1054.15a.2 | |||||||||
| D1054.15b.1 | |||||||||
| Other_sequence (90) | |||||||||
| Associated_feature | WBsf653036 | ||||||||
| WBsf981991 | |||||||||
| WBsf1001196 | |||||||||
| WBsf234448 | |||||||||
| Experimental_info | RNAi_result (22) | ||||||||
| Expr_pattern | Chronogram1158 | ||||||||
| Chronogram1900 | |||||||||
| Expr5614 | |||||||||
| Expr5615 | |||||||||
| Expr1027359 | |||||||||
| Expr1032649 | |||||||||
| Expr1147377 | |||||||||
| Expr1200249 | |||||||||
| Expr2014965 | |||||||||
| Expr2033200 | |||||||||
| Drives_construct | WBCnstr00002418 | ||||||||
| WBCnstr00004338 | |||||||||
| WBCnstr00037897 | |||||||||
| Construct_product | WBCnstr00037897 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (127) | |||||||||
| Map_info | Map | V | Position | 2.81677 | Error | 0.003281 | |||
| Positive | Positive_clone | D1054 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5089 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064651 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
