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WormBase Tree Display for Gene: WBGene00006559

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Name Class

WBGene00006559EvidenceAuthor_evidenceWoollard AS
SMapS_parentSequenceY73F8A
IdentityVersion1
NameCGC_nametbx-40
Sequence_nameY73F8A.17
Molecular_nameY73F8A.17
Y73F8A.17.1
CE22986
Other_nameCELE_Y73F8A.17Accession_evidenceNDBBX284604
Public_nametbx-40
DB_infoDatabaseAceViewgene4Q90
WormQTLgeneWBGene00006559
WormFluxgeneWBGene00006559
NDBlocus_tagCELE_Y73F8A.17
PanthergeneCAEEL|WormBase=WBGene00006559|UniProtKB=Q9NA55
familyPTHR11267
NCBIgene190679
RefSeqproteinNM_070451.3
SwissProtUniProtAccQ9NA55
UniProt_GCRPUniProtAccQ9NA55
OMIMgene300307
601719
602427
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:41WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtbx
Allele (48)
StrainWBStrain00051468
RNASeq_FPKM (74)
GO_annotation (13)
Ortholog (53)
Paralog (21)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell fate specification and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in phasmid neurons. Human ortholog(s) of this gene implicated in Abruzzo-Erickson syndrome; X-linked cleft palate with or without ankyloglossia; and bone disease (multiple). Is an ortholog of several human genes including TBX15 (T-box transcription factor 15); TBX4 (T-box transcription factor 4); and TBX6 (T-box transcription factor 6).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0111382Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11603)
DOID:381Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11603)
DOID:0111826Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11600)
DOID:0112363Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11605)
DOID:674Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11600)
DOID:0060613Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11600)
Molecular_infoCorresponding_CDSY73F8A.17
Corresponding_transcriptY73F8A.17.1
Associated_featureWBsf978888
WBsf231247
Transcription_factorWBTranscriptionFactor000484
Experimental_infoRNAi_resultWBRNAi00037817Inferred_automaticallyRNAi_primary
WBRNAi00058383Inferred_automaticallyRNAi_primary
Expr_patternExpr7742
Expr1161803
Expr2017355
Expr2035492
Drives_constructWBCnstr00012887
Microarray_results (13)
Expression_cluster (64)
InteractionWBInteraction000533588
WBInteraction000534465
Map_infoMapIVPosition13.5335Error0.014894
PositivePositive_cloneY73F8AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00024194
WBPaper00027309
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene