WormBase Tree Display for Gene: WBGene00006572
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| WBGene00006572 | SMap | S_parent | Sequence | C06G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tin-9.1 | Paper_evidence | WBPaper00024877 | |||||
| Person_evidence | WBPerson2173 | ||||||||
| Sequence_name | C06G3.11 | ||||||||
| Molecular_name | C06G3.11 | ||||||||
| C06G3.11.1 | |||||||||
| CE33518 | |||||||||
| Other_name | tim9a | Accession_evidence | EMBL | AF150108 | |||||
| CELE_C06G3.11 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | tin-9.1 | ||||||||
| DB_info | Database | AceView | gene | 4H808 | |||||
| WormQTL | gene | WBGene00006572 | |||||||
| WormFlux | gene | WBGene00006572 | |||||||
| NDB | locus_tag | CELE_C06G3.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006572|UniProtKB=Q17754 | |||||||
| family | PTHR13172 | ||||||||
| NCBI | gene | 177475 | |||||||
| RefSeq | protein | NM_001026136.7 | |||||||
| SwissProt | UniProtAcc | Q17754 | |||||||
| UniProt_GCRP | UniProtAcc | Q17754 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 14 Oct 2004 13:15:58 | WBPerson1971 | Name_change | CGC_name | tin-9 -> tin-9.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tin | ||||||||
| Allele | WBVar00919194 | ||||||||
| WBVar00919195 | |||||||||
| WBVar00919196 | |||||||||
| WBVar01499395 | |||||||||
| WBVar01499396 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00093359 | |||||||||
| WBVar02074287 | |||||||||
| WBVar01500245 | |||||||||
| Strain | WBStrain00037215 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00059071 | ||||||||
| 00059072 | |||||||||
| 00059073 | |||||||||
| 00059074 | |||||||||
| 00059075 | |||||||||
| 00059076 | |||||||||
| 00059077 | |||||||||
| 00059078 | |||||||||
| 00059079 | |||||||||
| 00059080 | |||||||||
| Ortholog (31) | |||||||||
| Structured_description | Concise_description | tin-9.1 encodes one of two C. elegans members of the Tin9 family of mitochondrial import proteins; TIN-9.1 activity is required for protein import into the mitochondrial inner membrane; TIN-9.1 is also required for normal fertility, embryonic development, body size, and time of reproductive onset. | Paper_evidence | WBPaper00024877 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 20 Jul 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable metal ion binding activity. Involved in protein insertion into mitochondrial inner membrane; regulation of growth; and reproduction. Predicted to be located in mitochondrial inner membrane. Is an ortholog of human TIMM9 (translocase of inner mitochondrial membrane 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06G3.11 | |||||||
| Corresponding_CDS_history | C06G3.11a:wp261 | ||||||||
| Corresponding_transcript | C06G3.11.1 | ||||||||
| Other_sequence | RS10139 | ||||||||
| RS06323 | |||||||||
| RSC00075_1 | |||||||||
| CBC14083_1 | |||||||||
| PPC05853_1 | |||||||||
| CR11317 | |||||||||
| RS06864 | |||||||||
| CRC04984_1 | |||||||||
| AYC00604_1 | |||||||||
| AE01873 | |||||||||
| Associated_feature | WBsf716574 | ||||||||
| WBsf717153 | |||||||||
| WBsf230216 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039930 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062815 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026862 | ||||||||
| Expr1032708 | |||||||||
| Expr1144007 | |||||||||
| Expr2017407 | |||||||||
| Expr2035546 | |||||||||
| Drives_construct | WBCnstr00034296 | ||||||||
| Construct_product | WBCnstr00034296 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | IV | Position | 3.28047 | Error | 0.000398 | |||
| Positive | Positive_clone | C06G3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024877 | ||||||||
| WBPaper00026571 | |||||||||
| WBPaper00036249 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042179 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | tim-9 was created on basis of AF150108/9 [020802 ck1] | ||||||||
| tim-9a/b are renamed to tin-9 based on its product classified as Transport to INner mitochondrial membrane (yeast TIM) - gene class tin [JAH] [020923 ck1] | |||||||||
| Renamed tin-9 to tin-9.1 as second copy of gene has been found [041014 krb] | CGC_data_submission | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
