WormBase Tree Display for Gene: WBGene00006618
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| WBGene00006618 | SMap | S_parent | Sequence | DY3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | trt-1 | Person_evidence | WBPerson261 | |||||
| Sequence_name | DY3.4 | ||||||||
| Molecular_name | DY3.4a | ||||||||
| DY3.4a.1 | |||||||||
| CE15748 | |||||||||
| DY3.4b | |||||||||
| CE27901 | |||||||||
| DY3.4a.2 | |||||||||
| DY3.4a.3 | |||||||||
| DY3.4b.1 | |||||||||
| DY3.4b.2 | |||||||||
| Other_name | CELE_DY3.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | trt-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trt | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00031417 | ||||||||
| WBStrain00040707 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Concise_description | trt-1 encodes C. elegans telomerase reverse transcriptase that affects fertility, maintenance of telomere length, and chromosome nondisjunction. | Paper_evidence | WBPaper00027101 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 19 Mar 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity; metal ion binding activity; and telomerase RNA reverse transcriptase activity. Involved in telomere maintenance via telomerase. Predicted to be located in chromosome, telomeric region and nucleus. Used to study cancer. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); hematologic cancer (multiple); and urinary system cancer (multiple). Is an ortholog of human TERT (telomerase reverse transcriptase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:162 | Homo sapiens | Paper_evidence | WBPaper00061243 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 02 May 2022 00:00:00 | ||||||||
| Potential_model | DOID:2154 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | |||||
| EFO:MONDO:0000148 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:3307 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:3910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:12449 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:9538 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:0050866 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:8991 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:3748 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:2671 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:12241 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:9513 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:0050156 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:9261 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:0050908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:10283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:1884 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:0050685 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:10534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:0060074 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:9952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:1324 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:4948 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:6432 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:1967 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:8552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:6846 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:11054 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:5016 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:0070016 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:9253 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:1883 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:1319 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:3907 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| DOID:9119 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11730) | ||||||
| Models_disease_asserted | WBDOannot00001172 | ||||||||
| Molecular_info | Corresponding_CDS | DY3.4a | |||||||
| DY3.4b | |||||||||
| Corresponding_transcript | DY3.4a.1 | ||||||||
| DY3.4a.2 | |||||||||
| DY3.4a.3 | |||||||||
| DY3.4b.1 | |||||||||
| DY3.4b.2 | |||||||||
| Associated_feature | WBsf643553 | ||||||||
| WBsf218213 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003301 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000765 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030443 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043551 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019797 | ||||||||
| Expr1032746 | |||||||||
| Expr1147543 | |||||||||
| Expr2017517 | |||||||||
| Expr2035656 | |||||||||
| Drives_construct | WBCnstr00034265 | ||||||||
| Construct_product | WBCnstr00034265 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000357773 | ||||||||
| WBInteraction000525404 | |||||||||
| Map_info | Map | I | Position | 3.09327 | Error | 0.00447 | |||
| Positive | Positive_clone | DY3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4741 | |||||||
| 4889 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (30) | |||||||||
| Remark | Sequence connection from [Ahmed S] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
