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WormBase Tree Display for Gene: WBGene00006618

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Name Class

WBGene00006618SMapS_parentSequenceDY3
IdentityVersion1
NameCGC_nametrt-1Person_evidenceWBPerson261
Sequence_nameDY3.4
Molecular_nameDY3.4a
DY3.4a.1
CE15748
DY3.4b
CE27901
DY3.4a.2
DY3.4a.3
DY3.4b.1
DY3.4b.2
Other_nameCELE_DY3.4Accession_evidenceNDBBX284601
Public_nametrt-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:41WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtrt
Allele (63)
StrainWBStrain00031417
WBStrain00040707
RNASeq_FPKM (74)
GO_annotation (13)
Ortholog (25)
Structured_description (2)
Disease_infoExperimental_modelDOID:162Homo sapiensPaper_evidenceWBPaper00061243
Curator_confirmedWBPerson324
Date_last_updated02 May 2022 00:00:00
Potential_model (39)
Models_disease_assertedWBDOannot00001172
Molecular_infoCorresponding_CDSDY3.4a
DY3.4b
Corresponding_transcriptDY3.4a.1
DY3.4a.2
DY3.4a.3
DY3.4b.1
DY3.4b.2
Associated_featureWBsf643553
WBsf218213
Experimental_infoRNAi_resultWBRNAi00003301Inferred_automaticallyRNAi_primary
WBRNAi00000765Inferred_automaticallyRNAi_primary
WBRNAi00030443Inferred_automaticallyRNAi_primary
WBRNAi00043551Inferred_automaticallyRNAi_primary
Expr_patternExpr1019797
Expr1032746
Expr1147543
Expr2017517
Expr2035656
Drives_constructWBCnstr00034265
Construct_productWBCnstr00034265
Microarray_results (28)
Expression_cluster (133)
InteractionWBInteraction000357773
WBInteraction000525404
Map_infoMapIPosition3.09327Error0.00447
PositivePositive_cloneDY3Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4741
4889
Pseudo_map_position
Reference (30)
RemarkSequence connection from [Ahmed S]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene