WormBase Tree Display for Gene: WBGene00006629
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| WBGene00006629 | SMap | S_parent | Sequence | Y39E4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tsp-3 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y39E4B.4 | ||||||||
| Molecular_name | Y39E4B.4 | ||||||||
| Y39E4B.4.1 | |||||||||
| CE21716 | |||||||||
| Other_name | CELE_Y39E4B.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tsp-3 | ||||||||
| DB_info | Database | AceView | gene | 3O301 | |||||
| WormQTL | gene | WBGene00006629 | |||||||
| WormFlux | gene | WBGene00006629 | |||||||
| NDB | locus_tag | CELE_Y39E4B.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006629|UniProtKB=Q9U2K6 | |||||||
| family | PTHR19282 | ||||||||
| NCBI | gene | 192059 | |||||||
| RefSeq | protein | NM_067323.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315786 | |||||||
| TrEMBL | UniProtAcc | Q9U2K6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2K6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tsp | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00037659 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099343 | ||||||||
| 00099344 | |||||||||
| 00114520 | |||||||||
| Ortholog (25) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39E4B.4 | |||||||
| Corresponding_transcript | Y39E4B.4.1 | ||||||||
| Other_sequence | CJC03129_1 | ||||||||
| MH00156 | |||||||||
| Associated_feature | WBsf994832 | ||||||||
| WBsf1016340 | |||||||||
| WBsf1016341 | |||||||||
| WBsf225971 | |||||||||
| WBsf225972 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036947 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056246 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020404 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006874 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022358 | ||||||||
| Expr1159730 | |||||||||
| Expr2017553 | |||||||||
| Expr2035691 | |||||||||
| Drives_construct | WBCnstr00034255 | ||||||||
| Construct_product | WBCnstr00034255 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction | WBInteraction000031403 | ||||||||
| WBInteraction000186877 | |||||||||
| WBInteraction000247646 | |||||||||
| WBInteraction000249298 | |||||||||
| WBInteraction000255784 | |||||||||
| WBInteraction000276740 | |||||||||
| WBInteraction000320793 | |||||||||
| WBInteraction000378068 | |||||||||
| WBInteraction000451206 | |||||||||
| Map_info | Map | III | Position | 21.1021 | Error | 0.012808 | |||
| Positive | Positive_clone | Y39E4B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033099 | ||||||||
| WBPaper00051085 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059947 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
