WormBase Tree Display for Gene: WBGene00006676
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| WBGene00006676 | Evidence | Person_evidence | WBPerson655 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F19D8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | twk-23 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F19D8.1 | ||||||||
| Molecular_name | F19D8.1a | ||||||||
| F19D8.1a.1 | |||||||||
| CE47571 | |||||||||
| F19D8.1b | |||||||||
| CE47637 | |||||||||
| F19D8.1c | |||||||||
| CE47671 | |||||||||
| F19D8.1b.1 | |||||||||
| F19D8.1c.1 | |||||||||
| Other_name | twk-6 | Person_evidence | WBPerson655 | ||||||
| CELE_F19D8.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | twk-23 | ||||||||
| DB_info | Database | AceView | gene | XO436 | |||||
| WormQTL | gene | WBGene00006676 | |||||||
| WormFlux | gene | WBGene00006676 | |||||||
| NDB | locus_tag | CELE_F19D8.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006676|UniProtKB=I2HAD3 | |||||||
| family | PTHR11003 | ||||||||
| NCBI | gene | 192071 | |||||||
| RefSeq | protein | NM_001270300.3 | |||||||
| NM_001270302.3 | |||||||||
| NM_001270301.4 | |||||||||
| TrEMBL | UniProtAcc | I2HAD3 | |||||||
| I2HAD2 | |||||||||
| I2HAD1 | |||||||||
| UniProt_GCRP | UniProtAcc | I2HAD3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | twk | ||||||||
| Allele (105) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (39) | |||||||||
| Paralog (47) | |||||||||
| Structured_description | Concise_description | twk-23 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; the precise role of TWK-23 in C. elegans development and/or behavior is not yet known, however TWK-23 may function redundantly with other TWK channels; TWK-23 is expressed in neurons, muscle, the posterior intestine, and diffusely in many other tissues. | Paper_evidence | WBPaper00004644 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in membrane. Expressed in intestine; muscle cell; and neurons. Is an ortholog of human KCNK2 (potassium two pore domain channel subfamily K member 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F19D8.1a | |||||||
| F19D8.1b | |||||||||
| F19D8.1c | |||||||||
| Corresponding_CDS_history | F19D8.1:wp231 | ||||||||
| Corresponding_transcript | F19D8.1a.1 | ||||||||
| F19D8.1b.1 | |||||||||
| F19D8.1c.1 | |||||||||
| Other_sequence | DAC00342_1 | ||||||||
| JI235292.1 | |||||||||
| DA02518 | |||||||||
| Associated_feature | WBsf671216 | ||||||||
| WBsf1007735 | |||||||||
| WBsf1007736 | |||||||||
| WBsf1024303 | |||||||||
| WBsf1024304 | |||||||||
| WBsf1024305 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045016 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1372 | ||||||||
| Expr1012881 | |||||||||
| Expr1148980 | |||||||||
| Expr2017650 | |||||||||
| Expr2035790 | |||||||||
| Drives_construct | WBCnstr00010246 | ||||||||
| WBCnstr00034221 | |||||||||
| Construct_product | WBCnstr00010246 | ||||||||
| WBCnstr00034221 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (73) | |||||||||
| Interaction (96) | |||||||||
| Map_info | Map | X | Position | 14.994 | Error | 0.019321 | |||
| Positive | Positive_clone | F19D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| F34D6 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006402 | ||||||||
| WBPaper00026748 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | twk-23 was connected to F34D6.3 | Person_evidence | WBPerson655 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
