WormBase Tree Display for Gene: WBGene00006824
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WBGene00006824 | Evidence | Paper_evidence | WBPaper00019431 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y105E8A | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | unc | ||||||
Allele (65) | |||||||
Legacy_information | su106sd : very slow or paralysed Egl; abnormal variable muscle birefringence disorganized sarcomeres with collections of thin filaments. ES3. NA4 (su33amber (simialr phenotypes ME0) etc.). | ||||||
[C.elegansII] su106sd : very slow or paralysed, Egl; abnormal variable muscle birefringence, disorganized sarcomeres with collections of thin filaments. ES3. OA3: su33amb (similar phenotypes, ME0), etc. [Zengel and Epstein 1980; HE] | |||||||
Strain (2) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (20) | |||||||
Ortholog (29) | |||||||
Paralog | WBGene00000438 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00002987 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00002988 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00003000 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00003167 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00006654 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00015216 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00017644 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00022518 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | unc-95 encodes a LIM domain-containing protein related to Drosophila and vertebrate paxillins; UNC-95 is required for locomotion and organization of thick and thin filaments in body wall muscle; by homology, UNC-95 may function as an anchor protein that links signaling and cytoskeletal proteins at focal adhesions; in vitro, UNC-95 interacts with RNF-5, a RING finger protein that may function as an E3 ligase to regulate UNC-95 levels via ubiquitin-mediated degradation; UNC-95 is expressed in body-wall and vulval muscles, and co-localizes with RNF-5 to muscle dense bodies (focal adhesion-like attachment sites). | Paper_evidence | WBPaper00000488 | |||
WBPaper00013295 | |||||||
WBPaper00019431 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables protein domain specific binding activity. Located in M band; nucleus; and striated muscle dense body. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y105E8A.6 | |||||
Corresponding_CDS_history | Y105E8A.6:wp86 | ||||||
Corresponding_transcript | Y105E8A.6.1 | ||||||
Other_sequence (34) | |||||||
Associated_feature | WBsf649756 | ||||||
WBsf665123 | |||||||
WBsf979068 | |||||||
WBsf986146 | |||||||
WBsf986147 | |||||||
WBsf1011238 | |||||||
WBsf220605 | |||||||
WBsf220606 | |||||||
WBsf220607 | |||||||
WBsf220608 | |||||||
Transcription_factor | WBTranscriptionFactor000438 | ||||||
Experimental_info | RNAi_result (13) | ||||||
Expr_pattern | Expr2991 | ||||||
Expr2992 | |||||||
Expr8314 | |||||||
Expr8542 | |||||||
Expr1012404 | |||||||
Expr1032888 | |||||||
Expr1158771 | |||||||
Expr2017921 | |||||||
Expr2036057 | |||||||
Drives_construct | WBCnstr00006034 | ||||||
WBCnstr00011070 | |||||||
WBCnstr00011071 | |||||||
WBCnstr00013356 | |||||||
WBCnstr00034135 | |||||||
Construct_product | WBCnstr00006034 | ||||||
WBCnstr00013356 | |||||||
WBCnstr00034135 | |||||||
Regulate_expr_cluster | WBPaper00031097:unc-95(su33)_upregulated | ||||||
Antibody | WBAntibody00001286 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (157) | |||||||
Interaction (56) | |||||||
WBProcess | WBbiopr:00000006 | ||||||
Map_info | Map | I | Position | 24.674 | Error | 0.00615 | |
Well_ordered | |||||||
Positive | Positive_clone | Y105E8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | 2_point | 392 | |||||
393 | |||||||
394 | |||||||
3684 | |||||||
3685 | |||||||
7080 | |||||||
Multi_point | 2332 | ||||||
4894 | |||||||
Pos_neg_data | 5109 | ||||||
5110 | |||||||
5111 | |||||||
5112 | |||||||
5113 | |||||||
5114 | |||||||
5115 | |||||||
Reference (31) | |||||||
Method | Gene |