WormBase Tree Display for Gene: WBGene00006831
expand all nodes | collapse all nodes | view schema
WBGene00006831 | SMap | S_parent | Sequence | C52E12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | unc-104 | Person_evidence | WBPerson261 | |||||
Sequence_name | C52E12.2 | ||||||||
Molecular_name | C52E12.2a | ||||||||
C52E12.2a.1 | |||||||||
CE48050 | |||||||||
C52E12.2b | |||||||||
CE47855 | |||||||||
C52E12.2a.2 | |||||||||
C52E12.2b.1 | |||||||||
Other_name | klp-1 | ||||||||
CELE_C52E12.2 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | unc-104 | ||||||||
DB_info | Database | AceView | gene | 2H299 | |||||
WormQTL | gene | WBGene00006831 | |||||||
WormFlux | gene | WBGene00006831 | |||||||
NDB | locus_tag | CELE_C52E12.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006831|UniProtKB=P23678 | |||||||
family | PTHR24115 | ||||||||
NCBI | gene | 174144 | |||||||
RefSeq | protein | NM_001026870.7 | |||||||
NM_171017.10 | |||||||||
SwissProt | UniProtAcc | P23678 | |||||||
UniProt_GCRP | UniProtAcc | P23678 | |||||||
OMIM | gene | 601255 | |||||||
603060 | |||||||||
605995 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
Reference_allele | WBVar00143874 | ||||||||
Allele (221) | |||||||||
Possibly_affected_by | WBVar02157549 | ||||||||
WBVar02157550 | |||||||||
WBVar02157551 | |||||||||
WBVar02157552 | |||||||||
WBVar02157553 | |||||||||
Legacy_information | L e1265 : severe coiler; e1265/Df probably lethal. ES3 ME0. NA1. | ||||||||
See also e2184 | |||||||||
[C.elegansII] e1265 : severe coiler; Ric; defects in neuroanatomy; poor response to dauer pheromone;abnormal transport of synaptic vesicles. e1265/Df probably lethal. ES3 ME0. OA>5: rh43(viable, severe), rh142 (sublethal), ut60 (lethal, arrest as coiler), ut104, e2184::Tc1,rh1016, rh1017. Cloned: >30 kb gene, 6 kb transcript, encodes 1584 aa kinesin family protein. [Otsuka et al. 1991; Hall and Hedgecock 1991; Nguyen et al. 1995; DD; NJ] | |||||||||
[Siddiqui SS]related to kinesin like protein by sequence similarity. | |||||||||
Strain (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (81) | |||||||||
Ortholog (51) | |||||||||
Paralog (19) | |||||||||
Structured_description | Concise_description | unc-104 encodes a kinesin-like motor protein homologous to human axonal transporter of synaptic vesicles (ATSV, OMIM: 601255); UNC-104 is required for anterograde axonal transport of synaptic vesicles as well as differentiation of pre- and postsynaptic domains at inhibitory neuromuscular junctions; UNC-104 is expressed solely in neurons; UNC-104 retrograde movement is regulated by PTL-1/Tau, with which it physically interacts in vivo. | Paper_evidence | WBPaper00001424 | |||||
WBPaper00005798 | |||||||||
WBPaper00038442 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 09 Aug 2011 00:00:00 | ||||||||
Automated_description | Enables cytoskeletal protein binding activity; phosphatidylinositol phosphate binding activity; and plus-end-directed microtubule motor activity. Involved in several processes, including chemical synaptic transmission; regulation of cellular component organization; and regulation of cellular localization. Located in axon; presynapse; and somatodendritic compartment. Expressed in epithelial cell; muscle cell; neurons; and somatic nervous system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease of the nervous system (multiple); carcinoma (multiple); and neuropathy (multiple). Is an ortholog of human KIF1A (kinesin family member 1A). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model (12) | ||||||||
Molecular_info | Corresponding_CDS | C52E12.2a | |||||||
C52E12.2b | |||||||||
Corresponding_CDS_history | C52E12.2a:wp93 | ||||||||
C52E12.2b:wp93 | |||||||||
Corresponding_transcript | C52E12.2a.1 | ||||||||
C52E12.2a.2 | |||||||||
C52E12.2b.1 | |||||||||
Other_sequence (59) | |||||||||
Associated_feature (12) | |||||||||
Experimental_info | RNAi_result (12) | ||||||||
Expr_pattern (15) | |||||||||
Drives_construct (41) | |||||||||
Construct_product (42) | |||||||||
Antibody | WBAntibody00000733 | ||||||||
WBAntibody00002213 | |||||||||
Microarray_results (29) | |||||||||
Expression_cluster (225) | |||||||||
Interaction (134) | |||||||||
Anatomy_function | WBbtf0455 | ||||||||
WBbtf0456 | |||||||||
WBbtf0457 | |||||||||
Map_info | Map | II | Position | 0.210467 | Error | 0.00612 | |||
Well_ordered | |||||||||
Positive | Inside_rearr | mC6 | |||||||
mDf18 | |||||||||
Positive_clone | C47A5 | ||||||||
C52E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
DD#LAJ8 | |||||||||
Negative | Outside_rearr | mcDf1 | |||||||
Mapping_data | 2_point | 948 | |||||||
3709 | |||||||||
6169 | |||||||||
Multi_point (16) | |||||||||
Pos_neg_data | 544 | ||||||||
548 | |||||||||
554 | |||||||||
597 | |||||||||
619 | |||||||||
4514 | |||||||||
4221 | |||||||||
4222 | |||||||||
8958 | |||||||||
10270 | |||||||||
Reference (308) | |||||||||
Remark | yk16g10.3 removed from sequence list. sdm 11/00 | ||||||||
klp-1 is the same gene as unc-104 and was therefore merged into unc-104 | |||||||||
Method | Gene |