WormBase Tree Display for Gene: WBGene00006853
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WBGene00006853 | SMap | S_parent | Sequence | C47G2 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | unc | |||||
Allele (36) | ||||||
Strain | WBStrain00031123 | |||||
WBStrain00040542 | ||||||
WBStrain00029988 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (27) | ||||||
Ortholog (60) | ||||||
Paralog | WBGene00001434 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00001438 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00001440 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00001441 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00001442 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00002601 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00003017 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00003976 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00004013 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00000912 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | A member of the forkhead domain family of transcription factors that affects the generation of the AWA and ASG chemosensory neurons and is partially required for male tail morphogenesis and embryogenesis; it is expressed in the AWA and ASG precursors; it is required for the graded spatial expression of the UNC-129 TGF-beta guidance factor. | Paper_evidence | WBPaper00004379 | ||
WBPaper00004380 | ||||||
Curator_confirmed | WBPerson324 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity and transcription corepressor activity. Involved in several processes, including axon extension involved in axon guidance; negative regulation of transcription by RNA polymerase II; and nematode male tail tip morphogenesis. Located in nucleus. Expressed in several structures, including HO neuron; hypodermis; ray; tail; and ventral body wall muscle. Human ortholog(s) of this gene implicated in glaucoma and vitiligo. Is an ortholog of several human genes including FOXD3 (forkhead box D3); FOXD4 (forkhead box D4); and FOXD4L1 (forkhead box D4 like 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:1686 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3804) | |
DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3804) | |||
Molecular_info | Corresponding_CDS | C47G2.2 | ||||
Corresponding_transcript | C47G2.2.1 | |||||
Other_sequence | Dviv_isotig17565 | |||||
CR11553 | ||||||
Dviv_isotig17564 | ||||||
CBC08749_1 | ||||||
CRC07576_1 | ||||||
CR11552 | ||||||
JI182349.1 | ||||||
JI165252.1 | ||||||
Associated_feature (15) | ||||||
Gene_product_binds (1114) | ||||||
Transcription_factor | WBTranscriptionFactor000007 | |||||
Experimental_info | RNAi_result | WBRNAi00000983 | Inferred_automatically | RNAi_primary | ||
WBRNAi00042701 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00090262 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00089792 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00029926 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00012086 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00090104 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00068017 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00113567 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00089944 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern (16) | ||||||
Drives_construct | WBCnstr00000479 | |||||
WBCnstr00007747 | ||||||
WBCnstr00014250 | ||||||
WBCnstr00016521 | ||||||
WBCnstr00034122 | ||||||
Construct_product | WBCnstr00007747 | |||||
WBCnstr00014834 | ||||||
WBCnstr00014906 | ||||||
WBCnstr00015401 | ||||||
WBCnstr00034122 | ||||||
Antibody | WBAntibody00000322 | |||||
Microarray_results (20) | ||||||
Expression_cluster (127) | ||||||
Interaction (185) | ||||||
Product_binds_matrix | WBPmat00005569 | |||||
Map_info (4) | ||||||
Reference (49) | ||||||
Method | Gene |