WormBase Tree Display for Gene: WBGene00006945
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| WBGene00006945 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | wars-1 | Person_evidence | WBPerson36 | |||||
| WBPerson10953 | |||||||||
| Sequence_name | Y80D3A.1 | ||||||||
| Molecular_name | Y80D3A.1 | ||||||||
| Y80D3A.1.1 | |||||||||
| CE35140 | |||||||||
| Other_name | wrs-1 | ||||||||
| CELE_Y80D3A.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | wars-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 29 Jan 2010 14:16:16 | WBPerson2970 | Name_change | CGC_name | wars-1 | ||||
| Other_name | wrs-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wars | ||||||||
| Allele (205) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP5472 | ||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00006946 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | wrs-1 encodes a predicted tryptophanyl-tRNA synthetase that affects fertility, embryonic viability, growth, and locomotion | Paper_evidence | WBPaper00005654 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 09 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable tryptophan-tRNA ligase activity. Predicted to be involved in tryptophanyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in distal hereditary motor neuronopathy type 9. Is an ortholog of human WARS1 (tryptophanyl-tRNA synthetase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111212 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12729) | ||||
| Molecular_info | Corresponding_CDS | Y80D3A.1 | |||||||
| Corresponding_CDS_history | Y80D3A.1:wp106 | ||||||||
| Corresponding_transcript | Y80D3A.1.1 | ||||||||
| Other_sequence (60) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009430 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058548 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064412 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095819 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110945 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093127 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026968 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009429 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020685 | ||||||||
| Expr1032959 | |||||||||
| Expr1161952 | |||||||||
| Expr2018048 | |||||||||
| Expr2036185 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction (66) | |||||||||
| Map_info | Map | V | Position | 18.3541 | Error | 0.016576 | |||
| Positive | Positive_clone | Y80D3A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005654 | ||||||||
| WBPaper00033090 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Connection made from predicted gene which has synthetase Pfam domain similarity. [sdm 12/01] | ||||||||
| dl1 : probably cytoplasmic | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
