WormBase Tree Display for Gene: WBGene00007056
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| WBGene00007056 | SMap | S_parent | Sequence | F09G8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | crn-7 | Person_evidence | WBPerson1606 | |||||
| Sequence_name | F09G8.2 | ||||||||
| Molecular_name | F09G8.2 | ||||||||
| F09G8.2.1 | |||||||||
| CE20662 | |||||||||
| Other_name | tag-198 | Person_evidence | WBPerson201 | ||||||
| CELE_F09G8.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | crn-7 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 13:09:06 | WBPerson1845 | Event | Created | |||
| 2 | 05 Oct 2005 17:16:53 | WBPerson2970 | Event | Acquires_merge | WBGene00017318 | ||||
| Name_change | Sequence_name | F09G8.2 | |||||||
| 3 | 24 Oct 2008 13:41:29 | WBPerson2970 | Name_change | CGC_name | crn-7 | ||||
| Acquires_merge | WBGene00017318 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | crn | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00035923 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042078 | ||||||||
| 00042079 | |||||||||
| 00042080 | |||||||||
| 00042081 | |||||||||
| 00042082 | |||||||||
| 00042083 | |||||||||
| 00115271 | |||||||||
| 00115272 | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00000799 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003828 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables deoxyribonuclease II activity. Involved in apoptotic DNA fragmentation. Acts upstream of or within with a positive effect on negative regulation of antimicrobial peptide production. Expressed in body wall musculature and head muscle. Is an ortholog of human DNASE2 (deoxyribonuclease 2, lysosomal). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09G8.2 | |||||||
| Corresponding_transcript | F09G8.2.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf645402 | ||||||||
| WBsf993281 | |||||||||
| WBsf225384 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044194 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005742 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030733 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044193 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013017 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005738 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005209 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044184 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15884 | ||||||||
| Expr1018651 | |||||||||
| Expr1033031 | |||||||||
| Expr1148143 | |||||||||
| Expr2010542 | |||||||||
| Expr2028782 | |||||||||
| Drives_construct | WBCnstr00037873 | ||||||||
| WBCnstr00042577 | |||||||||
| Construct_product | WBCnstr00005871 | ||||||||
| WBCnstr00005872 | |||||||||
| WBCnstr00005873 | |||||||||
| WBCnstr00037873 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction | WBInteraction000134143 | ||||||||
| WBInteraction000146276 | |||||||||
| WBInteraction000343252 | |||||||||
| WBInteraction000397694 | |||||||||
| WBInteraction000459538 | |||||||||
| Map_info | Map | III | Position | -0.351315 | Error | 0.000435 | |||
| Positive | Positive_clone | F09G8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5606 | |||||||
| 4934 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029366 | ||||||||
| WBPaper00034524 | |||||||||
| WBPaper00035228 | |||||||||
| WBPaper00035271 | |||||||||
| WBPaper00036623 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043691 | |||||||||
| WBPaper00047095 | |||||||||
| WBPaper00048424 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | tag-198 is parsed from CGC strain VC618 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
