WormBase Tree Display for Gene: WBGene00007073
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| WBGene00007073 | SMap | S_parent | Sequence | AC3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ugt-2 | Person_evidence | WBPerson1208 | |||||
| WBPerson655 | |||||||||
| Sequence_name | AC3.8 | ||||||||
| Molecular_name | AC3.8 | ||||||||
| AC3.8.1 | |||||||||
| CE35375 | |||||||||
| Other_name | CELE_AC3.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ugt-2 | ||||||||
| DB_info | Database | AceView | gene | 5K881 | |||||
| WormQTL | gene | WBGene00007073 | |||||||
| WormFlux | gene | WBGene00007073 | |||||||
| NDB | locus_tag | CELE_AC3.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007073|UniProtKB=Q17404 | |||||||
| family | PTHR48043 | ||||||||
| NCBI | gene | 179450 | |||||||
| RefSeq | protein | NM_073271.4 | |||||||
| TREEFAM | TREEFAM_ID | TF352368 | |||||||
| TrEMBL | UniProtAcc | Q17404 | |||||||
| UniProt_GCRP | UniProtAcc | Q17404 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ugt | ||||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00057956 | ||||||||
| 00057957 | |||||||||
| 00057958 | |||||||||
| 00057959 | |||||||||
| 00057960 | |||||||||
| 00057961 | |||||||||
| 00115294 | |||||||||
| Ortholog (51) | |||||||||
| Paralog (74) | |||||||||
| Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1); UGT3A2 (UDP glycosyltransferase family 3 member A2); and UGT8 (UDP glycosyltransferase 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | AC3.8 | |||||||
| Corresponding_CDS_history | AC3.8:wp109 | ||||||||
| Corresponding_transcript | AC3.8.1 | ||||||||
| Other_sequence | JI169658.1 | ||||||||
| Associated_feature | WBsf647155 | ||||||||
| WBsf661627 | |||||||||
| WBsf981984 | |||||||||
| WBsf232380 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00027919 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038600 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016740 | ||||||||
| Expr1142808 | |||||||||
| Expr2017775 | |||||||||
| Expr2035913 | |||||||||
| Drives_construct | WBCnstr00034017 | ||||||||
| Construct_product | WBCnstr00034017 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (237) | |||||||||
| Interaction | WBInteraction000246083 | ||||||||
| WBInteraction000318223 | |||||||||
| WBInteraction000394931 | |||||||||
| WBInteraction000436777 | |||||||||
| WBInteraction000436825 | |||||||||
| WBInteraction000441327 | |||||||||
| Map_info | Map | V | Position | 2.54587 | Error | 0.000399 | |||
| Positive | Positive_clone | AC3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055433 | |||||||||
| WBPaper00062515 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
