WormBase Tree Display for Gene: WBGene00007187

WBGene00007187 SMap: S_parent: Sequence: B0464
  Identity: Version: 2
    Name: CGC_name: tag-342
      Sequence_name: B0464.8
      Molecular_name: B0464.8
        B0464.8.1
        CE36465
      Other_name: CELE_B0464.8 Accession_evidence: NDB BX284603
      Public_name: tag-342
    DB_info: Database: AceView gene 3K559
        WormQTL gene WBGene00007187
        WormFlux gene WBGene00007187
        NDB locus_tag CELE_B0464.8
        Panther gene CAEEL|WormBase=WBGene00007187|UniProtKB=Q9XVX8
          family PTHR11380
        NCBI gene 176331
        RefSeq protein NM_066685.7
        TrEMBL UniProtAcc Q9XVX8
        UniProt_GCRP UniProtAcc Q9XVX8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 21 Jun 2005 09:45:25 WBPerson2970 Name_change: CGC_name: tag-342
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tag
    Allele (24)
    Strain: WBStrain00036188
    RNASeq_FPKM (74)
    GO_annotation: 00102931
      00102932
      00102933
      00102934
      00115399
    Contained_in_operon: CEOP3588
    Ortholog (23)
    Structured_description: Automated_description: Enables calmodulin binding activity. Predicted to be involved in positive regulation of DNA-templated transcription and transcription by RNA polymerase II. Predicted to be located in nucleus. Is an ortholog of human SUPT3H (SPT3 homolog, SAGA and STAGA complex component). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0464.8
    Corresponding_CDS_history: B0464.8b:wp121
    Corresponding_transcript: B0464.8.1
    Other_sequence: CBC02690_1
      CRC04494_1
      CGC00502_1
      CBC11496_1
      CGC00253_1
      CJC03773_1
      CR08343
    Associated_feature: WBsf645491
      WBsf225573
      WBsf225574
  Experimental_info: RNAi_result: WBRNAi00006015 Inferred_automatically: RNAi_primary
      WBRNAi00039094 Inferred_automatically: RNAi_primary
      WBRNAi00062093 Inferred_automatically: RNAi_primary
      WBRNAi00033507 Inferred_automatically: RNAi_primary
      WBRNAi00009797 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013393
      Expr1033094
      Expr1143253
      Expr2017277
      Expr2035412
    Drives_construct: WBCnstr00033936
    Construct_product: WBCnstr00033936
    Microarray_results (21)
    Expression_cluster (150)
    SAGE_tag: SAGE:agagcgaaat Strand: Sense
        Unambiguously_mapped
      SAGE:agagcgaaatcattttc Strand: Sense
        Unambiguously_mapped
    Interaction (68)
  Map_info: Map: III Position: 0.564732 Error: 0.001039
    Positive: Positive_clone: B0464 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5288
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene