WormBase Tree Display for Gene: WBGene00007270

WBGene00007270 SMap: S_parent: Sequence: C03C10
  Identity: Version: 2
    Name: CGC_name: rei-1 Paper_evidence: WBPaper00048710
          Person_evidence: WBPerson3858
      Sequence_name: C03C10.4
      Molecular_name: C03C10.4
        C03C10.4.1
        CE00875
      Other_name: CELE_C03C10.4 Accession_evidence: NDB BX284603
      Public_name: rei-1
    DB_info: Database: AceView gene 3F186
        WormQTL gene WBGene00007270
        WormFlux gene WBGene00007270
        NDB locus_tag CELE_C03C10.4
        Panther gene CAEEL|WormBase=WBGene00007270|UniProtKB=P42171
          family PTHR19423
        NCBI gene 175526
        RefSeq protein NM_001393313.1
        SwissProt UniProtAcc P42171
        TREEFAM TREEFAM_ID TF105573
        UniProt_GCRP UniProtAcc P42171
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Nov 2015 12:25:13 WBPerson2970 Name_change: CGC_name: rei-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rei
    Allele (12)
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog (38)
    Paralog: WBGene00019365 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enables guanyl-nucleotide exchange factor activity. Involved in protein localization to Golgi membrane. Located in Golgi trans cisterna membrane. Is an ortholog of human SH3BP5 (SH3 domain binding protein 5) and SH3BP5L (SH3 binding domain protein 5 like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C03C10.4
    Corresponding_transcript: C03C10.4.1
    Other_sequence: CJC01083_1
      CR10508
      CBC09335_1
      CR08917
      CRC01837_1
      CR02437
    Associated_feature: WBsf650956
      WBsf666746
      WBsf666747
      WBsf992018
      WBsf992019
      WBsf992020
      WBsf1014698
      WBsf1014699
      WBsf226469
      WBsf226470
  Experimental_info: RNAi_result: WBRNAi00113083 Inferred_automatically: RNAi_primary
      WBRNAi00039510 Inferred_automatically: RNAi_primary
      WBRNAi00113312 Inferred_automatically: RNAi_primary
      WBRNAi00005253 Inferred_automatically: RNAi_primary
      WBRNAi00028385 Inferred_automatically: RNAi_primary
      WBRNAi00010048 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12533
      Expr1023946
      Expr1033136
      Expr1143612
      Expr2015295
      Expr2033529
    Drives_construct: WBCnstr00021169
      WBCnstr00033869
    Construct_product: WBCnstr00021169
      WBCnstr00033869
    Antibody: WBAntibody00002663
    Microarray_results (19)
    Expression_cluster (132)
    Interaction (88)
  Map_info: Map: III Position: -3.80483
    Positive: Positive_clone: C03C10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00048710
    WBPaper00050600
    WBPaper00055090
    WBPaper00059310
    WBPaper00064057
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene