WormBase Tree Display for Gene: WBGene00007288
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| WBGene00007288 | SMap | S_parent | Sequence | C04A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C04A11.5 | |||||||
| Molecular_name | C04A11.5 | ||||||||
| C04A11.5.1 | |||||||||
| CE34651 | |||||||||
| C04A11.5.2 | |||||||||
| Other_name | CELE_C04A11.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C04A11.5 | ||||||||
| DB_info | Database | AceView | gene | XO283b | |||||
| WormQTL | gene | WBGene00007288 | |||||||
| WormFlux | gene | WBGene00007288 | |||||||
| NDB | locus_tag | CELE_C04A11.5 | |||||||
| NCBI | gene | 3565535 | |||||||
| RefSeq | protein | NM_001029183.6 | |||||||
| TrEMBL | UniProtAcc | Q7YX90 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YX90 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00029457 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| WormBase-Compara | |||||||||
| WBGene00148832 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00082659 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| CSP26.g8571 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP40.g17488 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cni-C04A11.5 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_03148.g29229 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| FL83_01581 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_025750 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g20459 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in excretory system; sensory neurons; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by nine chemicals including D-glucose; stavudine; and Sodium Chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C04A11.5 | |||||||
| Corresponding_transcript | C04A11.5.1 | ||||||||
| C04A11.5.2 | |||||||||
| Associated_feature | WBsf717392 | ||||||||
| Experimental_info | Expr_pattern | Expr1015477 | |||||||
| Expr1143672 | |||||||||
| Expr2000388 | |||||||||
| Expr2018611 | |||||||||
| Drives_construct | WBCnstr00033857 | ||||||||
| Construct_product | WBCnstr00033857 | ||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (121) | |||||||||
| Map_info | Positive | Positive_clone | C04A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 14.1151 | |||||||
| Method | Gene |
