WormBase Tree Display for Gene: WBGene00007304
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| WBGene00007304 | SMap | S_parent | Sequence | C04G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-39 | |||||||
| Sequence_name | C04G2.1 | ||||||||
| Molecular_name | C04G2.1a | ||||||||
| C04G2.1a.1 | |||||||||
| CE05211 | |||||||||
| C04G2.1b | |||||||||
| CE46559 | |||||||||
| C04G2.1b.1 | |||||||||
| Other_name | CELE_C04G2.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ttr-39 | ||||||||
| DB_info | Database | AceView | gene | 4K852 | |||||
| WormQTL | gene | WBGene00007304 | |||||||
| WormFlux | gene | WBGene00007304 | |||||||
| NDB | locus_tag | CELE_C04G2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007304|UniProtKB=Q17629 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 182231 | |||||||
| RefSeq | protein | NM_001268532.3 | |||||||
| NM_001268531.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | H2L2B1 | |||||||
| Q17629 | |||||||||
| UniProt_GCRP | UniProtAcc | Q17629 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-39 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058730 | ||||||||
| 00115474 | |||||||||
| Ortholog (45) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C04G2.1a | |||||||
| C04G2.1b | |||||||||
| Corresponding_transcript | C04G2.1a.1 | ||||||||
| C04G2.1b.1 | |||||||||
| Other_sequence | CJC18189_1 | ||||||||
| Associated_feature | WBsf997553 | ||||||||
| WBsf1018047 | |||||||||
| WBsf230665 | |||||||||
| WBsf230666 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010144 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028456 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027324 | ||||||||
| Expr1143749 | |||||||||
| Expr2017605 | |||||||||
| Expr2035743 | |||||||||
| Drives_construct | WBCnstr00005946 | ||||||||
| WBCnstr00007863 | |||||||||
| WBCnstr00009281 | |||||||||
| WBCnstr00009289 | |||||||||
| WBCnstr00009290 | |||||||||
| WBCnstr00033844 | |||||||||
| Construct_product | WBCnstr00033844 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (50) | |||||||||
| Map_info | Map | IV | Position | 4.49706 | Error | 0.002406 | |||
| Positive | Positive_clone | C04G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030346 | ||||||||
| WBPaper00037528 | |||||||||
| WBPaper00064370 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
