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WormBase Tree Display for Gene: WBGene00007321

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Name Class

WBGene00007321SMapS_parentSequenceC05B5
IdentityVersion1
NameSequence_nameC05B5.4
Molecular_nameC05B5.4
C05B5.4.1
CE00880
Other_nameCELE_C05B5.4Accession_evidenceNDBBX284603
Public_nameC05B5.4
DB_infoDatabaseAceViewgene3L81
WormQTLgeneWBGene00007321
WormFluxgeneWBGene00007321
NDBlocus_tagCELE_C05B5.4
PanthergeneCAEEL|WormBase=WBGene00007321|UniProtKB=P34292
familyPTHR38626
NCBIgene182246
RefSeqproteinNM_066815.2
SwissProtUniProtAccP34292
TREEFAMTREEFAM_IDTF315884
UniProt_GCRPUniProtAccP34292
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (42)
RNASeq_FPKM (74)
Ortholog (28)
ParalogWBGene00018828Caenorhabditis elegansFrom_analysisPanther
WBGene00011221Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00008080Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionC05B5.4 encodes a predicted transmembrane protein that is conserved in C. briggsae and C. remanei; loss of C05B5.4 activity via RNAi in the sensitized rrf-3 background has been reported to result in slow growth, although this phenotype could not be confirmed by retesting.Paper_evidenceWBPaper00006395
Curator_confirmedWBPerson1843
Date_last_updated11 Apr 2008 00:00:00
Automated_descriptionEnriched in several structures, including ABalaaaarl; ABalaaaarr; ABalapaaaa; AVE; and interfacial epithelial cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including Alovudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Uncharacterized protein C05B5.4-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05B5.4
Corresponding_transcriptC05B5.4.1
Other_sequenceJI172621.1
ASC27226_1
CBC07578_1
Associated_featureWBsf645534
WBsf645535
WBsf993878
WBsf993879
WBsf993880
WBsf1015714
WBsf1015715
WBsf225653
Experimental_infoRNAi_resultWBRNAi00024467Inferred_automaticallyRNAi_primary
WBRNAi00039688Inferred_automaticallyRNAi_primary
WBRNAi00028471Inferred_automaticallyRNAi_primary
WBRNAi00024466Inferred_automaticallyRNAi_primary
WBRNAi00006278Inferred_automaticallyRNAi_primary
WBRNAi00010171Inferred_automaticallyRNAi_primary
WBRNAi00027157Inferred_automaticallyRNAi_primary
Expr_patternExpr1019206
Expr1033152
Expr1143787
Expr2000439
Expr2018662
Drives_constructWBCnstr00033834
Construct_productWBCnstr00033834
Microarray_results (18)
Expression_cluster (137)
Map_infoPositivePositive_cloneC05B5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII1.4761
MethodGene