WormBase Tree Display for Gene: WBGene00007350
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| WBGene00007350 | SMap | S_parent | Sequence | C05G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sucl-1 | Person_evidence | WBPerson1983 | |||||
| WBPerson261 | |||||||||
| Sequence_name | C05G5.4 | ||||||||
| Molecular_name | C05G5.4 | ||||||||
| C05G5.4.1 | |||||||||
| CE05227 | |||||||||
| Other_name | CELE_C05G5.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | sucl-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Dec 2011 12:14:43 | WBPerson2970 | Name_change | CGC_name | sucl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sucl | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00047469 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00017759 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable succinate-CoA ligase (ADP-forming) activity and succinate-CoA ligase (GDP-forming) activity. Predicted to be involved in tricarboxylic acid cycle. Located in mitochondrion. Human ortholog(s) of this gene implicated in mitochondrial DNA depletion syndrome 9. Is an ortholog of human SUCLG1 (succinate-CoA ligase GDP/ADP-forming subunit alpha). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080128 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11449) | ||||
| Molecular_info | Corresponding_CDS | C05G5.4 | |||||||
| Corresponding_transcript | C05G5.4.1 | ||||||||
| Other_sequence (56) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00086467 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00086466 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010245 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028520 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039800 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086464 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018039 | ||||||||
| Expr1033166 | |||||||||
| Expr1143882 | |||||||||
| Expr2017103 | |||||||||
| Expr2035239 | |||||||||
| Drives_construct | WBCnstr00033810 | ||||||||
| Construct_product | WBCnstr00033810 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (183) | |||||||||
| Interaction (74) | |||||||||
| Map_info | Map | X | Position | 21.2519 | |||||
| Positive | Positive_clone | C05G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028381 | ||||||||
| WBPaper00031648 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
