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WormBase Tree Display for Gene: WBGene00007537

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Name Class

WBGene00007537SMapS_parentSequenceC12D8
IdentityVersion3
NameCGC_namefipr-8Person_evidenceWBPerson168
Sequence_nameC12D8.6
Molecular_nameC12D8.6
C12D8.6.1
CE45048
Other_nameCELE_C12D8.6Accession_evidenceNDBBX284605
Public_namefipr-8
DB_infoDatabaseAceViewgene5K720
WormQTLgeneWBGene00007537
WormFluxgeneWBGene00007537
NDBlocus_tagCELE_C12D8.6
PanthergeneCAEEL|WormBase=WBGene00007537|UniProtKB=Q17934
familyPTHR22552
NCBIgene182541
RefSeqproteinNM_001380740.3
TREEFAMTREEFAM_IDTF351414
TrEMBLUniProtAccQ17934
UniProt_GCRPUniProtAccQ17934
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
203 Apr 2007 10:48:52WBPerson2970Name_changeCGC_namefipr-8
326 May 2010 13:48:17WBPerson4025EventSplit_intoWBGene00195157
Split_intoWBGene00195157
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfipr
Allele (11)
RNASeq_FPKM (74)
Ortholog (34)
Paralog (17)
Structured_descriptionAutomated_descriptionEnriched in several structures, including AWC-OFF; MSaapaapa; MSpapaapa; anterior hypodermis; and pharyngeal cell based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including Ethanol; Psoralens; and allantoin based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC12D8.6
Corresponding_CDS_historyC12D8.6:wp186
C12D8.6:wp194
C12D8.6:wp215
Corresponding_transcriptC12D8.6.1
Other_sequenceCJC14093_1
CJC13217_1
Associated_featureWBsf652973
WBsf234357
Experimental_infoRNAi_resultWBRNAi00010655Inferred_automaticallyRNAi_primary
WBRNAi00040396Inferred_automaticallyRNAi_primary
Expr_patternExpr1144466
Expr2011791
Expr2030029
Drives_constructWBCnstr00033666
Construct_productWBCnstr00033666
Microarray_resultsSMD_C12D8.6
179462_at
Aff_C12D8.6
Expression_cluster (124)
Interaction (65)
Map_infoMapVPosition2.40538
PositivePositive_cloneC12D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene