WormBase Tree Display for Gene: WBGene00007603
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WBGene00007603 | SMap | S_parent | Sequence | C15C6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | popl-4 | Person_evidence | WBPerson3778 | |||||
Sequence_name | C15C6.4 | ||||||||
Molecular_name | C15C6.4 | ||||||||
C15C6.4.1 | |||||||||
CE18505 | |||||||||
Other_name | CELE_C15C6.4 | Accession_evidence | NDB | BX284601 | |||||
Public_name | popl-4 | ||||||||
DB_info | Database | AceView | gene | 1M805 | |||||
WormQTL | gene | WBGene00007603 | |||||||
WormFlux | gene | WBGene00007603 | |||||||
NDB | locus_tag | CELE_C15C6.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007603|UniProtKB=Q9XVT1 | |||||||
family | PTHR13348 | ||||||||
NCBI | gene | 173100 | |||||||
RefSeq | protein | NM_060682.7 | |||||||
TREEFAM | TREEFAM_ID | TF313883 | |||||||
TrEMBL | UniProtAcc | Q9XVT1 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVT1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 21 Nov 2019 11:04:57 | WBPerson1983 | Name_change | CGC_name | popl-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | popl | ||||||||
Allele (53) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (17) | |||||||||
Contained_in_operon | CEOP1664 | ||||||||
Ortholog (34) | |||||||||
Structured_description | Concise_description | C15C6.4 encodes an ortholog of Pop4 (Rpp29), a protein subunit of theendoribonuclease RNAse P, which cleaves tRNA precursors to producetheir mature 5' end; C15C6.4 is evolutionarily ubiquitous amongeukaryotes. | Paper_evidence | WBPaper00028606 | |||||
WBPaper00028843 | |||||||||
WBPaper00028845 | |||||||||
WBPaper00028925 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 06 Jan 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable ribonuclease P RNA binding activity. Predicted to be involved in rRNA processing. Predicted to be located in cytoplasm. Predicted to be part of ribonuclease MRP complex and ribonuclease P complex. Is an ortholog of human POP4 (POP4 homolog, ribonuclease P/MRP subunit). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C15C6.4 | |||||||
Corresponding_transcript | C15C6.4.1 | ||||||||
Other_sequence | CBC09453_1 | ||||||||
MH07670 | |||||||||
JI481710.1 | |||||||||
Associated_feature | WBsf985512 | ||||||||
WBsf985513 | |||||||||
WBsf1010865 | |||||||||
WBsf1010866 | |||||||||
WBsf218583 | |||||||||
Experimental_info | RNAi_result | WBRNAi00007934 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00024561 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024560 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022284 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040593 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028911 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116899 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018519 | ||||||||
Expr1033276 | |||||||||
Expr1144648 | |||||||||
Expr2000811 | |||||||||
Expr2019029 | |||||||||
Drives_construct | WBCnstr00033615 | ||||||||
Construct_product | WBCnstr00033615 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (93) | |||||||||
Interaction (28) | |||||||||
Map_info | Positive | Positive_clone | C15C6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 13.0727 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00064339 | |||||||||
Method | Gene |