WormBase Tree Display for Gene: WBGene00007785
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| WBGene00007785 | SMap | S_parent | Sequence | C27H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | tofu-1 | Paper_evidence | WBPaper00045063 | |||||
| Person_evidence | WBPerson3106 | ||||||||
| Sequence_name | C27H6.3 | ||||||||
| Molecular_name | C27H6.3 | ||||||||
| C27H6.3.1 | |||||||||
| CE41983 | |||||||||
| Other_name | slfl-1 | Paper_evidence | |||||||
| Person_evidence | WBPerson1159 | ||||||||
| CELE_C27H6.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | tofu-1 | ||||||||
| DB_info | Database | AceView | gene | 5K463 | |||||
| WormQTL | gene | WBGene00007785 | |||||||
| WormFlux | gene | WBGene00007785 | |||||||
| NDB | locus_tag | CELE_C27H6.3 | |||||||
| NCBI | gene | 179389 | |||||||
| RefSeq | protein | NM_073167.9 | |||||||
| SwissProt | UniProtAcc | O17608 | |||||||
| TREEFAM | TREEFAM_ID | TF320375 | |||||||
| UniProt_GCRP | UniProtAcc | O17608 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Mar 2014 15:50:22 | WBPerson2970 | Event | ||||||
| Name_change | CGC_name | tofu-1 | |||||||
| 3 | 29 Sep 2022 22:58:07 | WBPerson21950 | Name_change | Other_name | slfl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tofu | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030101 | ||||||||
| 00030102 | |||||||||
| 00030103 | |||||||||
| 00030104 | |||||||||
| 00030105 | |||||||||
| 00030106 | |||||||||
| 00030107 | |||||||||
| 00030108 | |||||||||
| Contained_in_operon | CEOP5571 | ||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00077500 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C27H6.3 | |||||||
| Corresponding_CDS_history | C27H6.3:wp82 | ||||||||
| C27H6.3:wp186 | |||||||||
| Corresponding_transcript | C27H6.3.1 | ||||||||
| Other_sequence | CBC07339_1 | ||||||||
| CR11621 | |||||||||
| CJC05862_1 | |||||||||
| CRC03564_1 | |||||||||
| Associated_feature | WBsf647121 | ||||||||
| WBsf647122 | |||||||||
| WBsf1020251 | |||||||||
| WBsf232311 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011281 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041382 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr16059 | ||||||||
| Expr1027489 | |||||||||
| Expr1033378 | |||||||||
| Expr1145416 | |||||||||
| Expr2017444 | |||||||||
| Expr2035583 | |||||||||
| Drives_construct | WBCnstr00033484 | ||||||||
| WBCnstr00042741 | |||||||||
| Construct_product | WBCnstr00033484 | ||||||||
| WBCnstr00042741 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | V | Position | 2.2253 | |||||
| Positive | Positive_clone | C27H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028430 | ||||||||
| WBPaper00045063 | |||||||||
| WBPaper00066064 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
