WormBase Tree Display for Gene: WBGene00007788
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| WBGene00007788 | SMap | S_parent | Sequence | C28A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C28A5.1 | |||||||
| Molecular_name | C28A5.1 | ||||||||
| C28A5.1.1 | |||||||||
| CE00675 | |||||||||
| Other_name | CELE_C28A5.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C28A5.1 | ||||||||
| DB_info | Database | AceView | gene | 3F520 | |||||
| WormQTL | gene | WBGene00007788 | |||||||
| WormFlux | gene | WBGene00007788 | |||||||
| NDB | locus_tag | CELE_C28A5.1 | |||||||
| NCBI | gene | 175580 | |||||||
| RefSeq | protein | NM_065500.7 | |||||||
| TrEMBL | UniProtAcc | Q18271 | |||||||
| UniProt_GCRP | UniProtAcc | Q18271 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3801 | ||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00007789 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including body wall muscle cell from C lineage; germ line; head mesodermal cell; intestinal muscle; and rectal muscle based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including rotenone; manganese chloride; and Alovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C28A5.1 | |||||||
| Corresponding_transcript | C28A5.1.1 | ||||||||
| Associated_feature | WBsf650976 | ||||||||
| WBsf992118 | |||||||||
| WBsf992119 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1024241 | ||||||||
| Expr1033381 | |||||||||
| Expr1145420 | |||||||||
| Expr2001190 | |||||||||
| Expr2019412 | |||||||||
| Drives_construct | WBCnstr00033481 | ||||||||
| Construct_product | WBCnstr00033481 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (96) | |||||||||
| Map_info | Positive | Positive_clone | C28A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -3.17344 | |||||||
| Reference | WBPaper00029208 | ||||||||
| Method | Gene |
