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WormBase Tree Display for Gene: WBGene00007844

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Name Class

WBGene00007844SMapS_parentSequenceC31E10
IdentityVersion3
NameCGC_nameirld-24Person_evidenceWBPerson260
Sequence_nameC31E10.3
Molecular_nameC31E10.3a
C31E10.3a.1
CE53390
C31E10.3b
CE08504
C31E10.3b.1
Other_nameCELE_C31E10.3Accession_evidenceNDBBX284606
Public_nameirld-24
DB_infoDatabaseAceViewgeneXO605
WormQTLgeneWBGene00007844
WormFluxgeneWBGene00007844
NDBlocus_tagCELE_C31E10.3
PanthergeneCAEEL|WormBase=WBGene00007844|UniProtKB=Q93312
familyPTHR21662
NCBIgene183087
RefSeqproteinNM_077931.5
NM_001373563.3
TrEMBLUniProtAccA0A4V0IKJ5
Q93313
UniProt_GCRPUniProtAccA0A4V0IKJ5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
225 May 2012 15:57:08WBPerson2970Name_changeCGC_nameirld-24
320 May 2019 15:21:47WBPerson4025EventAcquires_mergeWBGene00007845
Acquires_mergeWBGene00007845
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classirld
Allele (77)
RNASeq_FPKM (74)
Ortholog (61)
Paralog (75)
Structured_descriptionAutomated_descriptionEnriched in SMBDL; SMBDR; SMBVL; SMBVR; and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including tryptophan; Psoralens; and allantoin based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC31E10.3a
C31E10.3b
Corresponding_CDS_historyC31E10.3:wp57
C31E10.3:wp271
Corresponding_transcriptC31E10.3a.1
C31E10.3b.1
Associated_featureWBsf1007793
WBsf1007794
Experimental_infoRNAi_resultWBRNAi00041612Inferred_automaticallyRNAi_primary
WBRNAi00011438Inferred_automaticallyRNAi_primary
WBRNAi00041611Inferred_automaticallyRNAi_primary
WBRNAi00011439Inferred_automaticallyRNAi_primary
WBRNAi00029384Inferred_automaticallyRNAi_primary
Expr_patternExpr1020917
Expr1026535
Expr1145636
Expr1145637
Expr2001278
Expr2019500
Drives_constructWBCnstr00033439
WBCnstr00033440
Construct_productWBCnstr00033439
WBCnstr00033440
Microarray_results (32)
Expression_cluster (62)
InteractionWBInteraction000317507
WBInteraction000363537
WBInteraction000433114
WBInteraction000439790
WBInteraction000452501
WBInteraction000461672
Map_infoMapXPosition15.9255
PositivePositive_cloneC31E10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene