WormBase Tree Display for Gene: WBGene00007975
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| WBGene00007975 | SMap | S_parent | Sequence | C36B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gls-1 | Paper_evidence | WBPaper00033036 | |||||
| Person_evidence | WBPerson150 | ||||||||
| Sequence_name | C36B1.8 | ||||||||
| Molecular_name | C36B1.8a | ||||||||
| C36B1.8a.1 | |||||||||
| CE34472 | |||||||||
| C36B1.8b | |||||||||
| CE34473 | |||||||||
| C36B1.8c | |||||||||
| CE43936 | |||||||||
| C36B1.8b.1 | |||||||||
| C36B1.8c.1 | |||||||||
| Other_name | CELE_C36B1.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gls-1 | ||||||||
| DB_info | Database | AceView | gene | 1J317 | |||||
| WormQTL | gene | WBGene00007975 | |||||||
| WormFlux | gene | WBGene00007975 | |||||||
| NDB | locus_tag | CELE_C36B1.8 | |||||||
| NCBI | gene | 172682 | |||||||
| RefSeq | protein | NM_001263949.3 | |||||||
| NM_059964.4 | |||||||||
| NM_182082.6 | |||||||||
| SwissProt | UniProtAcc | Q8I4M5 | |||||||
| TREEFAM | TREEFAM_ID | TF350156 | |||||||
| UniProt_GCRP | UniProtAcc | Q8I4M5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Apr 2010 13:55:15 | WBPerson2970 | Name_change | CGC_name | gls-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gls | ||||||||
| Allele (70) | |||||||||
| Strain | WBStrain00036828 | ||||||||
| WBStrain00007424 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083797 | ||||||||
| 00083798 | |||||||||
| 00083799 | |||||||||
| 00083800 | |||||||||
| 00083801 | |||||||||
| 00083802 | |||||||||
| 00083803 | |||||||||
| 00083804 | |||||||||
| Contained_in_operon | CEOP1982 | ||||||||
| Ortholog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II complex binding activity. Predicted to be involved in mRNA 3'-end processing. Located in P granule. Part of polysome. Expressed in germ line. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C36B1.8a | |||||||
| C36B1.8b | |||||||||
| C36B1.8c | |||||||||
| Corresponding_CDS_history | C36B1.8:wp90 | ||||||||
| C36B1.8a:wp104 | |||||||||
| C36B1.8b:wp104 | |||||||||
| Corresponding_transcript | C36B1.8a.1 | ||||||||
| C36B1.8b.1 | |||||||||
| C36B1.8c.1 | |||||||||
| Other_sequence | CBC03160_1 | ||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr8619 | ||||||||
| Expr8620 | |||||||||
| Expr1011232 | |||||||||
| Expr1033463 | |||||||||
| Expr1146040 | |||||||||
| Expr2012125 | |||||||||
| Expr2030361 | |||||||||
| Drives_construct | WBCnstr00033336 | ||||||||
| Construct_product | WBCnstr00033336 | ||||||||
| Antibody | WBAntibody00001901 | ||||||||
| WBAntibody00001902 | |||||||||
| WBAntibody00001927 | |||||||||
| WBAntibody00001928 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (140) | |||||||||
| SAGE_tag (15) | |||||||||
| Interaction (57) | |||||||||
| Map_info | Map | I | Position | 3.04581 | Error | 0.001316 | |||
| Positive | Positive_clone | C36B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033036 | ||||||||
| WBPaper00033118 | |||||||||
| WBPaper00033153 | |||||||||
| WBPaper00035915 | |||||||||
| WBPaper00035916 | |||||||||
| WBPaper00036822 | |||||||||
| WBPaper00045597 | |||||||||
| WBPaper00045796 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
