WormBase Tree Display for Gene: WBGene00007980
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| WBGene00007980 | SMap | S_parent | Sequence | C36E8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tif-1A | Person_evidence | WBPerson10060 | |||||
| Sequence_name | C36E8.1 | ||||||||
| Molecular_name | C36E8.1 | ||||||||
| C36E8.1.1 | |||||||||
| CE00909 | |||||||||
| Other_name | CELE_C36E8.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tif-1A | ||||||||
| DB_info | Database | AceView | gene | 3F90 | |||||
| WormQTL | gene | WBGene00007980 | |||||||
| WormFlux | gene | WBGene00007980 | |||||||
| NDB | locus_tag | CELE_C36E8.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007980|UniProtKB=P48322 | |||||||
| family | PTHR12790 | ||||||||
| NCBI | gene | 175517 | |||||||
| RefSeq | protein | NM_001393312.1 | |||||||
| SwissProt | UniProtAcc | P48322 | |||||||
| TREEFAM | TREEFAM_ID | TF312979 | |||||||
| UniProt_GCRP | UniProtAcc | P48322 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Mar 2022 23:57:00 | WBPerson51134 | Name_change | CGC_name | tif-1A | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tif | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00036457 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046872 | ||||||||
| 00046873 | |||||||||
| 00046874 | |||||||||
| 00046875 | |||||||||
| 00115969 | |||||||||
| 00115970 | |||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase I core binding activity and RNA polymerase I general transcription initiation factor activity. Predicted to be involved in transcription initiation at RNA polymerase I promoter. Predicted to be located in nucleus. Is an ortholog of human RRN3 (RRN3 homolog, RNA polymerase I transcription factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C36E8.1 | |||||||
| Corresponding_transcript | C36E8.1.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature (12) | |||||||||
| Transcription_factor | WBTranscriptionFactor000579 | ||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr1025543 | ||||||||
| Expr1033468 | |||||||||
| Expr1146074 | |||||||||
| Expr2001483 | |||||||||
| Expr2019704 | |||||||||
| Drives_construct | WBCnstr00033332 | ||||||||
| Construct_product | WBCnstr00033332 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (114) | |||||||||
| Map_info | Map | III | Position | -4.06055 | |||||
| Positive | Positive_clone | C36E8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
