WormBase Tree Display for Gene: WBGene00008015

WBGene00008015 SMap: S_parent: Sequence: C38D9
  Identity: Version: 2
    Name: CGC_name: fbxa-174 Person_evidence: WBPerson655
      Sequence_name: C38D9.7
      Molecular_name: C38D9.7
        C38D9.7.1
        CE24835
      Other_name: CELE_C38D9.7 Accession_evidence: NDB BX284605
      Public_name: fbxa-174
    DB_info: Database: AceView gene 5S38
        WormQTL gene WBGene00008015
        WormFlux gene WBGene00008015
        NDB locus_tag CELE_C38D9.7
        Panther gene CAEEL|WormBase=WBGene00008015|UniProtKB=Q9U3N2
          family PTHR23015
        NCBI gene 183318
        RefSeq protein NM_075046.1
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9U3N2
        UniProt_GCRP UniProtAcc Q9U3N2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-174
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (68)
    RNASeq_FPKM (74)
    Ortholog (20)
    Paralog (226)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in DA neuron; VA neuron; body wall muscle cell; and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and pgl-1 based on microarray and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C38D9.7
    Corresponding_transcript: C38D9.7.1
    Associated_feature: WBsf1002690
  Experimental_info: RNAi_result: WBRNAi00042172 Inferred_automatically: RNAi_primary
      WBRNAi00029667 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1146167
      Expr2029736
    Drives_construct: WBCnstr00033306
    Construct_product: WBCnstr00033306
    Microarray_results (15)
    Expression_cluster (81)
  Map_info: Map: V Position: 12.9187 Error: 4.2e-05
    Positive: Positive_clone: C38D9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene