WormBase Tree Display for Gene: WBGene00008183
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| WBGene00008183 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | rin-1 | Person_evidence | WBPerson919 | |||||
| Sequence_name | C48G7.3 | ||||||||
| Molecular_name (27) | |||||||||
| Other_name | tag-333 | ||||||||
| CELE_C48G7.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | rin-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Jun 2005 09:45:25 | WBPerson2970 | Name_change | CGC_name | tag-333 | ||||
| 3 | 27 Mar 2008 16:33:23 | WBPerson4025 | Event | Acquires_merge | WBGene00008181 | ||||
| 4 | 27 Mar 2008 16:35:51 | WBPerson4025 | Event | Acquires_merge | WBGene00008182 | ||||
| 5 | 25 Sep 2012 16:10:46 | WBPerson2970 | Name_change | CGC_name | rin-1 | ||||
| Other_name | tag-333 | ||||||||
| Acquires_merge | WBGene00008181 | ||||||||
| WBGene00008182 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rin | ||||||||
| Allele (463) | |||||||||
| Strain | WBStrain00036257 | ||||||||
| WBStrain00036266 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (64) | |||||||||
| Paralog | WBGene00004377 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012644 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables GTPase binding activity. Involved in dorsal/ventral axon guidance and neuron migration. Located in cell periphery; cytoplasm; and filopodium. Expressed in body wall musculature; gonad; head neurons; and hypodermis. Is an ortholog of human RIN2 (Ras and Rab interactor 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C48G7.3a | |||||||
| C48G7.3d | |||||||||
| C48G7.3f | |||||||||
| C48G7.3g | |||||||||
| C48G7.3h | |||||||||
| C48G7.3i | |||||||||
| C48G7.3j | |||||||||
| C48G7.3k | |||||||||
| C48G7.3l | |||||||||
| Corresponding_CDS_history | C48G7.3:wp189 | ||||||||
| C48G7.3b:wp270 | |||||||||
| C48G7.3c:wp270 | |||||||||
| C48G7.3e:wp270 | |||||||||
| Corresponding_transcript | C48G7.3a.1 | ||||||||
| C48G7.3d.1 | |||||||||
| C48G7.3f.1 | |||||||||
| C48G7.3g.1 | |||||||||
| C48G7.3h.1 | |||||||||
| C48G7.3i.1 | |||||||||
| C48G7.3j.1 | |||||||||
| C48G7.3k.1 | |||||||||
| C48G7.3l.1 | |||||||||
| Other_sequence (113) | |||||||||
| Associated_feature (61) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042750 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020850 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042749 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042751 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029951 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012106 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012105 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11191 | ||||||||
| Expr11192 | |||||||||
| Expr11193 | |||||||||
| Expr11194 | |||||||||
| Expr1020269 | |||||||||
| Expr1033557 | |||||||||
| Expr1146739 | |||||||||
| Expr2015360 | |||||||||
| Expr2033594 | |||||||||
| Drives_construct | WBCnstr00018208 | ||||||||
| WBCnstr00037864 | |||||||||
| Construct_product | WBCnstr00018209 | ||||||||
| WBCnstr00018210 | |||||||||
| WBCnstr00018211 | |||||||||
| WBCnstr00037864 | |||||||||
| Microarray_results (66) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000115681 | ||||||||
| WBInteraction000164212 | |||||||||
| WBInteraction000287811 | |||||||||
| WBInteraction000539263 | |||||||||
| WBInteraction000540009 | |||||||||
| WBInteraction000547223 | |||||||||
| WBInteraction000556252 | |||||||||
| WBInteraction000574141 | |||||||||
| WBInteraction000574634 | |||||||||
| WBInteraction000582328 | |||||||||
| Map_info | Map | V | Position | 6.87656 | Error | 0.014308 | |||
| Positive | Positive_clone | C48G7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5289 | |||||||
| 4632 | |||||||||
| 4978 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031805 | ||||||||
| WBPaper00036252 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043985 | |||||||||
| WBPaper00052700 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
