WormBase Tree Display for Gene: WBGene00008208
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| WBGene00008208 | SMap | S_parent | Sequence | C49F5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-167 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C49F5.4 | ||||||||
| Molecular_name | C49F5.4 | ||||||||
| C49F5.4.1 | |||||||||
| CE08855 | |||||||||
| Other_name | CELE_C49F5.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nhr-167 | ||||||||
| DB_info | Database | AceView | gene | XM600 | |||||
| WormQTL | gene | WBGene00008208 | |||||||
| WormFlux | gene | WBGene00008208 | |||||||
| NDB | locus_tag | CELE_C49F5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008208|UniProtKB=O17683 | |||||||
| family | PTHR45886 | ||||||||
| NCBI | gene | 183613 | |||||||
| RefSeq | protein | NM_077603.6 | |||||||
| SwissProt | UniProtAcc | O17683 | |||||||
| TREEFAM | TREEFAM_ID | TF315373 | |||||||
| UniProt_GCRP | UniProtAcc | O17683 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-167 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (53) | |||||||||
| Strain | WBStrain00030242 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030373 | ||||||||
| 00030374 | |||||||||
| 00030375 | |||||||||
| 00030376 | |||||||||
| 00116143 | |||||||||
| 00116144 | |||||||||
| 00116145 | |||||||||
| 00116146 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49F5.4 | |||||||
| Corresponding_transcript | C49F5.4.1 | ||||||||
| Associated_feature | WBsf654454 | ||||||||
| WBsf978572 | |||||||||
| WBsf1007149 | |||||||||
| WBsf1023955 | |||||||||
| WBsf238026 | |||||||||
| Transcription_factor | WBTranscriptionFactor000884 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012147 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042810 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025210 | ||||||||
| Expr1146790 | |||||||||
| Expr2014067 | |||||||||
| Expr2032307 | |||||||||
| Drives_construct | WBCnstr00033154 | ||||||||
| Construct_product | WBCnstr00016838 | ||||||||
| WBCnstr00033154 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction | WBInteraction000216169 | ||||||||
| WBInteraction000342991 | |||||||||
| WBInteraction000395148 | |||||||||
| WBInteraction000428902 | |||||||||
| WBInteraction000562807 | |||||||||
| Map_info | Map | X | Position | 6.87345 | Error | 0.035583 | |||
| Positive | Positive_clone | C49F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5325 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
