WormBase Tree Display for Gene: WBGene00008278
expand all nodes | collapse all nodes | view schema
| WBGene00008278 | SMap | S_parent | Sequence | C53C7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-10 | Paper_evidence | WBPaper00033064 | |||||
| Person_evidence | WBPerson42 | ||||||||
| Sequence_name | C53C7.1 | ||||||||
| Molecular_name | C53C7.1a | ||||||||
| C53C7.1a.1 | |||||||||
| CE19767 | |||||||||
| C53C7.1b | |||||||||
| CE36989 | |||||||||
| C53C7.1a.2 | |||||||||
| C53C7.1b.1 | |||||||||
| Other_name | CELE_C53C7.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | npr-10 | ||||||||
| DB_info | Database | AceView | gene | XN634 | |||||
| WormQTL | gene | WBGene00008278 | |||||||
| WormFlux | gene | WBGene00008278 | |||||||
| NDB | locus_tag | CELE_C53C7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008278|UniProtKB=Q9XXU4 | |||||||
| family | PTHR24235 | ||||||||
| NCBI | gene | 183747 | |||||||
| RefSeq | protein | NM_001029316.4 | |||||||
| NM_001029317.3 | |||||||||
| TrEMBL | UniProtAcc | Q9XXU4 | |||||||
| Q6EUU1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XXU4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 May 2009 14:29:51 | WBPerson9133 | Name_change | CGC_name | npr-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (231) | |||||||||
| Strain | WBStrain00032024 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Predicted to enable neuropeptide binding activity and neuropeptide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in neuron projection and plasma membrane. Expressed in RMEV; ciliated neurons; and ganglia. Human ortholog(s) of this gene implicated in artery disease (multiple); lipid metabolism disorder; and obesity. Is an ortholog of human PRLHR (prolactin releasing hormone receptor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7958) | ||||
| DOID:3146 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7958) | ||||||
| DOID:0050830 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7958) | ||||||
| DOID:10763 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4464) | ||||||
| Molecular_info | Corresponding_CDS | C53C7.1a | |||||||
| C53C7.1b | |||||||||
| Corresponding_transcript | C53C7.1a.1 | ||||||||
| C53C7.1a.2 | |||||||||
| C53C7.1b.1 | |||||||||
| Other_sequence | CJC11560_1 | ||||||||
| JI224784.1 | |||||||||
| FJ456886.1 | |||||||||
| Associated_feature | WBsf1007503 | ||||||||
| WBsf1007504 | |||||||||
| WBsf1007505 | |||||||||
| WBsf1007506 | |||||||||
| WBsf1024171 | |||||||||
| WBsf238098 | |||||||||
| WBsf238099 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043087 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030111 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012357 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072203 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15833 | ||||||||
| Expr15834 | |||||||||
| Expr1018667 | |||||||||
| Expr1147052 | |||||||||
| Expr2014395 | |||||||||
| Expr2032636 | |||||||||
| Drives_construct | WBCnstr00033090 | ||||||||
| WBCnstr00042540 | |||||||||
| Construct_product | WBCnstr00033090 | ||||||||
| WBCnstr00042540 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (84) | |||||||||
| Interaction | WBInteraction000030160 | ||||||||
| WBInteraction000032037 | |||||||||
| WBInteraction000305389 | |||||||||
| WBInteraction000320874 | |||||||||
| WBInteraction000334023 | |||||||||
| WBInteraction000375442 | |||||||||
| WBInteraction000394749 | |||||||||
| WBInteraction000505876 | |||||||||
| WBInteraction000576912 | |||||||||
| Map_info | Map | X | Position | 9.6717 | Error | 0.083925 | |||
| Positive | Positive_clone | C53C7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027520 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055865 | |||||||||
| WBPaper00061871 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
