WormBase Tree Display for Gene: WBGene00008288
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| WBGene00008288 | SMap | S_parent | Sequence | C54C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cfap-20 | Person_evidence | WBPerson2136 | |||||
| WBPerson11843 | |||||||||
| Sequence_name | C54C6.6 | ||||||||
| Molecular_name | C54C6.6 | ||||||||
| C54C6.6.1 | |||||||||
| CE33367 | |||||||||
| Other_name | CELE_C54C6.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cfap-20 | ||||||||
| DB_info | Database | AceView | gene | 3E626 | |||||
| WormQTL | gene | WBGene00008288 | |||||||
| WormFlux | gene | WBGene00008288 | |||||||
| NDB | locus_tag | CELE_C54C6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008288|UniProtKB=Q86D25 | |||||||
| family | PTHR12458 | ||||||||
| NCBI | gene | 353416 | |||||||
| RefSeq | protein | NM_181977.3 | |||||||
| SwissProt | UniProtAcc | Q86D25 | |||||||
| TREEFAM | TREEFAM_ID | TF313405 | |||||||
| UniProt_GCRP | UniProtAcc | Q86D25 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | cfap-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cfap | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Contained_in_operon | CEOP3820 | ||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00009901 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in cilium assembly; positive regulation of feeding behavior; and regulation of cell motility. Predicted to be located in microtubule cytoskeleton and motile cilium. Is an ortholog of human CFAP20 (cilia and flagella associated protein 20). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54C6.6 | |||||||
| Corresponding_transcript | C54C6.6.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf650913 | ||||||||
| WBsf991801 | |||||||||
| WBsf991802 | |||||||||
| WBsf1014582 | |||||||||
| WBsf226361 | |||||||||
| Experimental_info | Expr_pattern | Expr1024956 | |||||||
| Expr1033598 | |||||||||
| Expr1147083 | |||||||||
| Expr2001905 | |||||||||
| Expr2020129 | |||||||||
| Drives_construct | WBCnstr00033081 | ||||||||
| Construct_product | WBCnstr00033081 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction | WBInteraction000171977 | ||||||||
| WBInteraction000466960 | |||||||||
| WBInteraction000552576 | |||||||||
| WBInteraction000566888 | |||||||||
| WBInteraction000567660 | |||||||||
| Map_info | Map | III | Position | -5.87001 | |||||
| Positive | Positive_clone | C54C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064662 | |||||||||
| WBPaper00065813 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
