WormBase Tree Display for Gene: WBGene00008306

WBGene00008306 SMap: S_parent: Sequence: C54E10
  Identity: Version: 2
    Name: Sequence_name: C54E10.1
      Molecular_name: C54E10.1
      Other_name: CELE_C54E10.1 Accession_evidence: NDB BX284605
      Public_name: C54E10.1
    DB_info: Database: AceView gene 5T297
        WormQTL gene WBGene00008306
        WormFlux gene WBGene00008306
        NDB locus_tag CELE_C54E10.1
        NCBI gene 183791
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 21 Sep 2017 13:46:43 WBPerson4025 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Allele (80)
    RNASeq_FPKM (74)
    Ortholog: WBGene00072867 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00024163 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00023528 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00025357 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00029408 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
      WBGene00042461 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
      WBGene00042638 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00029291 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00033117 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00130288 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
    Paralog: WBGene00021863 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enriched in AFD; ASER; AVK; and neurons based on RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Alovudine; Doxycycline; and paraquat based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: C54E10.1:wp121
      C54E10.1:wp261
    Corresponding_pseudogene: C54E10.1
  Experimental_info: Expr_pattern: Expr1012197
      Expr1147120
      Expr2001919
      Expr2020142
    Microarray_results: SMD_C54E10.1
      181384_at
      Aff_C54E10.1
      GPL14144_C54E10.1_941-1000_0.804_65_A
      GPL19516_CGZ0010534
      GPL21109_C54E10.1
      GPL8304_CE_WBGene00008306_A
      GPL8673_C54E10_1P01340
      GPL8673_C54E10_1P01567
      GPL8673_C54E10_1P01704
    Expression_cluster (73)
    Interaction (30)
  Map_info: Positive: Positive_clone: C54E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 18.032
  Method: Gene