WormBase Tree Display for Gene: WBGene00008311
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| WBGene00008311 | SMap | S_parent | Sequence | C54G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rskn-2 | Person_evidence | WBPerson555 | |||||
| Sequence_name | C54G4.1 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_C54G4.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | rskn-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Apr 2005 11:05:24 | WBPerson2970 | Name_change | CGC_name | rskn-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rskn | ||||||||
| Allele (79) | |||||||||
| Strain | WBStrain00002833 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Contained_in_operon | CEOP1444 | ||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00012929 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011352 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044281 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017898 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in cytoplasm and nucleoplasm. Is an ortholog of human RPS6KA4 (ribosomal protein S6 kinase A4) and RPS6KA5 (ribosomal protein S6 kinase A5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54G4.1a | |||||||
| C54G4.1b | |||||||||
| C54G4.1c | |||||||||
| C54G4.1d | |||||||||
| Corresponding_CDS_history | C54G4.1:wp90 | ||||||||
| Corresponding_transcript | C54G4.1a.1 | ||||||||
| C54G4.1b.1 | |||||||||
| C54G4.1c.1 | |||||||||
| C54G4.1d.1 | |||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf716937 | ||||||||
| WBsf717532 | |||||||||
| WBsf984329 | |||||||||
| WBsf1010180 | |||||||||
| WBsf218103 | |||||||||
| WBsf218104 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Chronogram939 | ||||||||
| Expr3608 | |||||||||
| Expr5588 | |||||||||
| Expr1022412 | |||||||||
| Expr1033601 | |||||||||
| Expr1147154 | |||||||||
| Expr2015556 | |||||||||
| Expr2033791 | |||||||||
| Drives_construct | WBCnstr00003355 | ||||||||
| WBCnstr00033067 | |||||||||
| Construct_product | WBCnstr00011533 | ||||||||
| WBCnstr00033067 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (172) | |||||||||
| Interaction (104) | |||||||||
| Map_info | Map | I | Position | 2.41935 | Error | 0.000924 | |||
| Positive | Positive_clone | C54G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025754 | ||||||||
| WBPaper00027258 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
