WormBase Tree Display for Gene: WBGene00008428
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| WBGene00008428 | SMap | S_parent | Sequence | D2085 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eif-2Bepsilon | Person_evidence | WBPerson2266 | |||||
| Sequence_name | D2085.3 | ||||||||
| Molecular_name | D2085.3 | ||||||||
| D2085.3.1 | |||||||||
| CE03107 | |||||||||
| Other_name | CELE_D2085.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | eif-2Bepsilon | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Jan 2017 15:00:31 | WBPerson2970 | Name_change | CGC_name | eif-2Bepsilon | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eif | ||||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063172 | ||||||||
| 00063173 | |||||||||
| 00063174 | |||||||||
| 00063175 | |||||||||
| 00063176 | |||||||||
| 00063177 | |||||||||
| 00063178 | |||||||||
| Contained_in_operon | CEOP2380 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00004090 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00016583 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021628 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | D2085.3 encodes the C. elegans ortholog of the epsilon subunit of translation initiation factor eIF2B. | Paper_evidence | WBPaper00032308 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 02 Dec 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity; translation initiation factor activity; and translation initiation factor binding activity. Predicted to be involved in translational initiation. Predicted to be part of eukaryotic translation initiation factor 2B complex. Human ortholog(s) of this gene implicated in leukoencephalopathy with vanishing white matter 5. Is an ortholog of human EIF2B5 (eukaryotic translation initiation factor 2B subunit epsilon). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070367 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3261) | ||||
| DOID:0060868 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3261) | ||||||
| Molecular_info | Corresponding_CDS | D2085.3 | |||||||
| Corresponding_transcript | D2085.3.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf644495 | ||||||||
| WBsf644496 | |||||||||
| WBsf657988 | |||||||||
| WBsf221800 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00008582 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00106684 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024962 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030418 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043502 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091062 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064418 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5630 | ||||||||
| Expr1024266 | |||||||||
| Expr1033660 | |||||||||
| Expr1147497 | |||||||||
| Expr2011246 | |||||||||
| Expr2029482 | |||||||||
| Drives_construct | WBCnstr00002677 | ||||||||
| WBCnstr00032970 | |||||||||
| Construct_product | WBCnstr00032970 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (98) | |||||||||
| Map_info | Map | II | Position | 0.838548 | |||||
| Positive | Positive_clone | D2085 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027281 | ||||||||
| WBPaper00029435 | |||||||||
| WBPaper00032308 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
