WormBase Tree Display for Gene: WBGene00008518
expand all nodes | collapse all nodes | view schema
| WBGene00008518 | SMap | S_parent | Sequence | F02C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-2 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F02C12.4 | ||||||||
| Molecular_name | F02C12.4 | ||||||||
| F02C12.4.1 | |||||||||
| CE03134 | |||||||||
| Other_name | CELE_F02C12.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | irld-2 | ||||||||
| DB_info | Database | AceView | gene | XO8 | |||||
| WormQTL | gene | WBGene00008518 | |||||||
| WormFlux | gene | WBGene00008518 | |||||||
| NDB | locus_tag | CELE_F02C12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008518|UniProtKB=Q19110 | |||||||
| family | PTHR21662 | ||||||||
| NCBI | gene | 184077 | |||||||
| RefSeq | protein | NM_077826.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317243 | |||||||
| TrEMBL | UniProtAcc | Q19110 | |||||||
| UniProt_GCRP | UniProtAcc | Q19110 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irld | ||||||||
| Allele (71) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (75) | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by paraquat based on RNA-seq studies. Is predicted to encode a protein with the following domains: Receptor L domain; Receptor L-domain; and Receptor L-domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F02C12.4 | |||||||
| Corresponding_transcript | F02C12.4.1 | ||||||||
| Associated_feature | WBsf1007604 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00043795 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1017811 | ||||||||
| Expr1147770 | |||||||||
| Expr2012840 | |||||||||
| Expr2031077 | |||||||||
| Drives_construct | WBCnstr00032902 | ||||||||
| Construct_product | WBCnstr00032902 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (64) | |||||||||
| Interaction | WBInteraction000235290 | ||||||||
| WBInteraction000266384 | |||||||||
| WBInteraction000270809 | |||||||||
| WBInteraction000281598 | |||||||||
| WBInteraction000295982 | |||||||||
| WBInteraction000322417 | |||||||||
| WBInteraction000383226 | |||||||||
| WBInteraction000424220 | |||||||||
| WBInteraction000446492 | |||||||||
| Map_info | Map | X | Position | 11.8468 | |||||
| Positive | Positive_clone | F02C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065080 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
