WormBase Tree Display for Gene: WBGene00008591
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| WBGene00008591 | SMap | S_parent | Sequence | F08H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F08H9.3 | |||||||
| Molecular_name | F08H9.3 | ||||||||
| F08H9.3.1 | |||||||||
| CE09267 | |||||||||
| Other_name | CELE_F08H9.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F08H9.3 | ||||||||
| DB_info | Database | AceView | gene | 5O942 | |||||
| WormQTL | gene | WBGene00008591 | |||||||
| WormFlux | gene | WBGene00008591 | |||||||
| NDB | locus_tag | CELE_F08H9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008591|UniProtKB=Q19227 | |||||||
| family | PTHR45640 | ||||||||
| NCBI | gene | 184214 | |||||||
| RefSeq | protein | NM_074184.4 | |||||||
| TrEMBL | UniProtAcc | Q19227 | |||||||
| UniProt_GCRP | UniProtAcc | Q19227 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063980 | ||||||||
| 00063981 | |||||||||
| 00063982 | |||||||||
| 00063983 | |||||||||
| 00063984 | |||||||||
| Ortholog (55) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | F08H9.3 encodes a heat shock protein (HSP) of the HSP16 class; unlike most HSP16s in C. elegans, it is specifically expressed in a particular tissue (the larval pharynx and the anterior adult pharynx), and its expression is not strongly induced by heat shock; however, F08H9.3 expression is increased by heat shock (with adult expression in the full pharynx) and probably aids heat shock resistance, since F08H9.3(RNAi) animals have sensitivity to heat shock that is sporadically higher than normal; in general, HSP16 proteins are thought to act as passive ligands for unfolded proteins that keep them safe from aggregation until the proteins can be refolded by a large (ATP-consuming) HSP. | Paper_evidence | WBPaper00005740 | |||||
| WBPaper00013029 | |||||||||
| WBPaper00013239 | |||||||||
| WBPaper00013280 | |||||||||
| WBPaper00013579 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable unfolded protein binding activity. Predicted to be involved in protein refolding and response to heat. Predicted to be located in cytoplasm and nucleus. Expressed in intestinal cell and pharynx. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08H9.3 | |||||||
| Corresponding_transcript | F08H9.3.1 | ||||||||
| Associated_feature | WBsf979021 | ||||||||
| WBsf234954 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr2457 | ||||||||
| Expr15511 | |||||||||
| Expr1010802 | |||||||||
| Expr1148027 | |||||||||
| Expr2002314 | |||||||||
| Expr2020533 | |||||||||
| Drives_construct | WBCnstr00010845 | ||||||||
| WBCnstr00032848 | |||||||||
| WBCnstr00042202 | |||||||||
| Construct_product | WBCnstr00032848 | ||||||||
| WBCnstr00042202 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (175) | |||||||||
| Interaction (60) | |||||||||
| Map_info | Positive | Positive_clone | F08H9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.4131 | |||||||
| Reference | WBPaper00005740 | ||||||||
| WBPaper00013029 | |||||||||
| WBPaper00028419 | |||||||||
| WBPaper00031124 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00044578 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060685 | |||||||||
| Method | Gene |
