WormBase Tree Display for Gene: WBGene00008706
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| WBGene00008706 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | gba-3 | Person_evidence | WBPerson17187 | |||||
| Sequence_name | F11E6.1 | ||||||||
| Molecular_name | F11E6.1a | ||||||||
| F11E6.1a.1 | |||||||||
| CE20669 | |||||||||
| F11E6.1b | |||||||||
| CE26698 | |||||||||
| F11E6.1d | |||||||||
| CE46394 | |||||||||
| F11E6.1b.1 | |||||||||
| F11E6.1c | |||||||||
| F11E6.1d.1 | |||||||||
| Other_name | CELE_F11E6.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gba-3 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Mar 2012 16:42:47 | WBPerson2970 | Name_change | CGC_name | gba-3 | ||||
| 3 | 10 Jun 2014 12:12:12 | WBPerson1983 | Event | Acquires_merge | WBGene00043070 | ||||
| Acquires_merge | WBGene00043070 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gba | ||||||||
| Allele (183) | |||||||||
| Strain | WBStrain00003177 | ||||||||
| WBStrain00037693 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00012398 | ||||||||
| 00012399 | |||||||||
| 00012400 | |||||||||
| 00012401 | |||||||||
| 00012402 | |||||||||
| 00012403 | |||||||||
| 00012404 | |||||||||
| 00012405 | |||||||||
| 00116576 | |||||||||
| 00116577 | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00021160 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016340 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016335 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | gab-3 is homologous to to the human gene GLUCOCEREBROSIDASE (GBA; OMIM:606463), which when mutated leads to Gaucher disease. | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable glucosylceramidase activity. Predicted to be involved in glucosylceramide catabolic process. Human ortholog(s) of this gene implicated in several diseases, including Gaucher's disease (multiple); Lewy body dementia; and Netherton syndrome. Is an ortholog of human GBA1 (glucosylceramidase beta 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (12) | ||||||||
| Molecular_info | Corresponding_CDS | F11E6.1a | |||||||
| F11E6.1b | |||||||||
| F11E6.1d | |||||||||
| Corresponding_CDS_history | F11E6.1:wp39 | ||||||||
| F11E6.1c:wp245 | |||||||||
| Corresponding_transcript | F11E6.1c | ||||||||
| F11E6.1a.1 | |||||||||
| F11E6.1b.1 | |||||||||
| F11E6.1d.1 | |||||||||
| Other_sequence (65) | |||||||||
| Associated_feature | WBsf660997 | ||||||||
| WBsf660998 | |||||||||
| WBsf999045 | |||||||||
| WBsf229641 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030825 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002265 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013136 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009510 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044390 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044391 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram2009 | ||||||||
| Expr13183 | |||||||||
| Expr1016635 | |||||||||
| Expr1033791 | |||||||||
| Expr1148335 | |||||||||
| Expr2011952 | |||||||||
| Expr2030189 | |||||||||
| Drives_construct | WBCnstr00003653 | ||||||||
| WBCnstr00007423 | |||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction | WBInteraction000218116 | ||||||||
| WBInteraction000344308 | |||||||||
| WBInteraction000413692 | |||||||||
| WBInteraction000539818 | |||||||||
| WBInteraction000550973 | |||||||||
| WBInteraction000574224 | |||||||||
| Map_info | Map | IV | Position | 17.1536 | |||||
| Positive | Positive_clone | F11E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00053559 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00066025 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag. | |||||||||
| Method | Gene |
