WormBase Tree Display for Gene: WBGene00008808
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| WBGene00008808 | SMap | S_parent | Sequence | F14F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ntr-2 | Paper_evidence | WBPaper00041683 | |||||
| WBPaper00041684 | |||||||||
| Person_evidence | WBPerson11490 | ||||||||
| WBPerson6671 | |||||||||
| Sequence_name | F14F4.1 | ||||||||
| Molecular_name | F14F4.1 | ||||||||
| F14F4.1.1 | |||||||||
| CE17670 | |||||||||
| Other_name | CELE_F14F4.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ntr-2 | ||||||||
| DB_info | Database | AceView | gene | XP542 | |||||
| WormQTL | gene | WBGene00008808 | |||||||
| WormFlux | gene | WBGene00008808 | |||||||
| NDB | locus_tag | CELE_F14F4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008808|UniProtKB=O62169 | |||||||
| family | PTHR24224 | ||||||||
| NCBI | gene | 184471 | |||||||
| RefSeq | protein | NM_078076.4 | |||||||
| SwissProt | UniProtAcc | O62169 | |||||||
| UniProt_GCRP | UniProtAcc | O62169 | |||||||
| OMIM | gene | 300538 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Nov 2012 15:46:40 | WBPerson2970 | Name_change | CGC_name | ntr-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ntr | ||||||||
| Allele (72) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037218 | ||||||||
| 00037219 | |||||||||
| 00037220 | |||||||||
| 00037221 | |||||||||
| 00037222 | |||||||||
| 00037223 | |||||||||
| 00037224 | |||||||||
| 00116650 | |||||||||
| 00116651 | |||||||||
| 00116652 | |||||||||
| Ortholog (40) | |||||||||
| Paralog (28) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in RMEV; ganglia; intestine; and oblique male muscle. Human ortholog(s) of this gene implicated in several diseases, including ACTH-secreting pituitary adenoma; X-linked recessive disease (multiple); and portal hypertension. Is an ortholog of several human genes including AVPR1A (arginine vasopressin receptor 1A); AVPR1B (arginine vasopressin receptor 1B); and AVPR2 (arginine vasopressin receptor 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (11) | ||||||||
| Molecular_info | Corresponding_CDS | F14F4.1 | |||||||
| Corresponding_transcript | F14F4.1.1 | ||||||||
| Other_sequence | Dviv_isotig19181 | ||||||||
| JI169423.1 | |||||||||
| EX828496.1 | |||||||||
| Acan_isotig09823 | |||||||||
| ACC10182_1 | |||||||||
| Dviv_isotig26823 | |||||||||
| Associated_feature | WBsf1008038 | ||||||||
| WBsf1024480 | |||||||||
| WBsf238268 | |||||||||
| WBsf238269 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00072208 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044618 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11370 | ||||||||
| Expr11373 | |||||||||
| Expr11374 | |||||||||
| Expr1025110 | |||||||||
| Expr1148586 | |||||||||
| Expr2014518 | |||||||||
| Expr2032757 | |||||||||
| Drives_construct | WBCnstr00015596 | ||||||||
| WBCnstr00015597 | |||||||||
| WBCnstr00018667 | |||||||||
| WBCnstr00018668 | |||||||||
| WBCnstr00018669 | |||||||||
| WBCnstr00032669 | |||||||||
| Construct_product | WBCnstr00018669 | ||||||||
| WBCnstr00032669 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (75) | |||||||||
| Interaction | WBInteraction000152471 | ||||||||
| WBInteraction000159112 | |||||||||
| WBInteraction000162463 | |||||||||
| WBInteraction000162613 | |||||||||
| WBInteraction000166776 | |||||||||
| WBInteraction000327426 | |||||||||
| WBInteraction000436298 | |||||||||
| Map_info | Map | X | Position | 21.5718 | |||||
| Positive | Positive_clone | F14F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00053007 | |||||||||
| WBPaper00053687 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
