WormBase Tree Display for Gene: WBGene00008830

WBGene00008830 SMap: S_parent: Sequence: F14H3
  Identity: Version: 2
    Name: CGC_name: nhr-176 Person_evidence: WBPerson600
      Sequence_name: F14H3.11
      Molecular_name: F14H3.11
        F14H3.11.1
        CE35482
      Other_name: CELE_F14H3.11 Accession_evidence: NDB BX284605
      Public_name: nhr-176
    DB_info: Database: AceView gene 5Q551
        WormQTL gene WBGene00008830
        WormFlux gene WBGene00008830
        NDB locus_tag CELE_F14H3.11
        Panther gene CAEEL|WormBase=WBGene00008830|UniProtKB=O45365
          family PTHR46011
        NCBI gene 184496
        RefSeq protein NM_074644.3
        SwissProt UniProtAcc O45365
        TREEFAM TREEFAM_ID TF323089
        UniProt_GCRP UniProtAcc O45365
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Jul 2005 10:29:12 WBPerson2970 Name_change: CGC_name: nhr-176
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (56)
    Strain: WBStrain00035357
      WBStrain00035358
      WBStrain00035359
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (35)
    Paralog (217)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F14H3.11
    Corresponding_CDS_history: F14H3.11:wp109
    Corresponding_transcript: F14H3.11.1
    Associated_feature: WBsf647619
      WBsf978654
    Transcription_factor: WBTranscriptionFactor000988
  Experimental_info: RNAi_result: WBRNAi00030967 Inferred_automatically: RNAi_primary
      WBRNAi00013319 Inferred_automatically: RNAi_primary
      WBRNAi00114371 Inferred_automatically: RNAi_primary
      WBRNAi00113854 Inferred_automatically: RNAi_primary
      WBRNAi00044651 Inferred_automatically: RNAi_primary
      WBRNAi00114370 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram73
      Chronogram903
      Chronogram1112
      Expr7505
      Expr1027684
      Expr1033850
      Expr1148624
      Expr2014077
      Expr2032317
    Drives_construct: WBCnstr00001167
      WBCnstr00001168
      WBCnstr00001169
      WBCnstr00012650
      WBCnstr00032651
    Construct_product: WBCnstr00032651
    Microarray_results (22)
    Expression_cluster: WBPaper00029359_1444
      WBPaper00029359_1504
      WBPaper00029359_1639
      WBPaper00029359_1678
      WBPaper00029359_1681
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00035211:age-1_vs_age-1_downregulated
      WBPaper00035211:age-1_vs_N2_downregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:intestine_CoreEnriched
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:intestine_larva_enriched
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00046338:intestine_unique
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00049334:CE_intestine_enriched
      WBPaper00049942:HeatShock_downregulated_hsf-1(+)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050990:intestine_enriched
      WBPaper00050990:intestine_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054872:egl-9(sa307)_downregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055226:ADR-2_target_adr-1(tm668)
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055827:pfd-6(gk493446)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055897:heat-shock_downregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00057068:ints-4(RNAi)_downregulated
      WBPaper00057158:mdt-15(tm2182)_dependent_15C_downregulated
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059604:fluvastatin_downregulated_dlk-1(km12)
      WBPaper00059604:fluvastatin_downregulated_N2
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061007:HB101_upregulated
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061340:Intestine
      WBPaper00061340:Neuroblast_ALA_RMED
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:cyp-14A1-R186.1_5533
      WBPaper00061590:CGP37157_upregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064716:paraquat_downregulated
      WBPaper00065086:N2_N.ausubeli_regulated
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065835:Day11_vs_Day1_downregulated
      WBPaper00065877:rege-1(imm070)_upregulated_OP50
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4489_group_22
      WBPaper00026980:intestine_enriched
      WBPaper00027111:rrf-1(pk1417)_upregulated
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00036286:Pattern_I
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045960:L4-lethargus_upregulated
  Map_info: Map: V Position: 9.46034 Error: 0.003726
    Positive: Positive_clone: F14H3 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5313
        4662
    Pseudo_map_position
  Reference: WBPaper00043063
    WBPaper00044018
    WBPaper00046025
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene