WormBase Tree Display for Gene: WBGene00008916
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| WBGene00008916 | SMap | S_parent | Sequence | F17C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-221 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F17C11.5 | ||||||||
| Molecular_name | F17C11.5 | ||||||||
| F17C11.5.1 | |||||||||
| CE05652 | |||||||||
| Other_name | CELE_F17C11.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-221 | ||||||||
| DB_info | Database | AceView | gene | 5L434 | |||||
| WormQTL | gene | WBGene00008916 | |||||||
| WormFlux | gene | WBGene00008916 | |||||||
| NDB | locus_tag | CELE_F17C11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008916|UniProtKB=Q19516 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 184615 | |||||||
| RefSeq | protein | NM_073394.4 | |||||||
| TREEFAM | TREEFAM_ID | TF318554 | |||||||
| TrEMBL | UniProtAcc | Q19516 | |||||||
| UniProt_GCRP | UniProtAcc | Q19516 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-221 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (114) | |||||||||
| Structured_description | Automated_description | Enriched in AIZL; AIZR; and male-specific anatomical entity based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by thirteen chemicals including Tunicamycin; Alovudine; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F17C11.5 | |||||||
| Corresponding_transcript | F17C11.5.1 | ||||||||
| Other_sequence | CJC02434_1 | ||||||||
| CJC03134_1 | |||||||||
| Associated_feature | WBsf234471 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044877 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031067 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013459 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012410 | ||||||||
| Expr1148843 | |||||||||
| Expr2010128 | |||||||||
| Expr2028369 | |||||||||
| Drives_construct | WBCnstr00032597 | ||||||||
| Construct_product | WBCnstr00032597 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction | WBInteraction000241930 | ||||||||
| WBInteraction000284523 | |||||||||
| WBInteraction000360538 | |||||||||
| WBInteraction000395213 | |||||||||
| WBInteraction000399281 | |||||||||
| Map_info | Map | V | Position | 2.83921 | Error | 0.001523 | |||
| Positive | Positive_clone | F17C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| WBPaper00061938 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
