WormBase Tree Display for Gene: WBGene00008918
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| WBGene00008918 | SMap | S_parent | Sequence | F17C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pigt-1 | |||||||
| Sequence_name | F17C11.7 | ||||||||
| Molecular_name | F17C11.7a | ||||||||
| F17C11.7a.1 | |||||||||
| CE05654 | |||||||||
| F17C11.7b | |||||||||
| CE37354 | |||||||||
| F17C11.7b.1 | |||||||||
| Other_name | CELE_F17C11.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pigt-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Dec 2018 16:50:34 | WBPerson1983 | Name_change | CGC_name | pigt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pigt | ||||||||
| Allele (19) | |||||||||
| Strain | WBStrain00052112 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00064952 | ||||||||
| 00064953 | |||||||||
| 00064954 | |||||||||
| 00116726 | |||||||||
| 00116727 | |||||||||
| Contained_in_operon | CEOP5268 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in attachment of GPI anchor to protein. Predicted to be located in membrane. Predicted to be part of GPI-anchor transamidase complex. Human ortholog(s) of this gene implicated in multiple congenital anomalies-hypotonia-seizures syndrome 3 and paroxysmal nocturnal hemoglobinuria. Is an ortholog of human PIGT (phosphatidylinositol glycan anchor biosynthesis class T). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080140 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14938) | ||||
| DOID:0060284 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14938) | ||||||
| Molecular_info | Corresponding_CDS | F17C11.7a | |||||||
| F17C11.7b | |||||||||
| Corresponding_CDS_history | F17C11.7:wp131 | ||||||||
| Corresponding_transcript | F17C11.7a.1 | ||||||||
| F17C11.7b.1 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf234472 | ||||||||
| WBsf234473 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062017 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00111239 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025124 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027284 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031068 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044879 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013461 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024279 | ||||||||
| Expr1033880 | |||||||||
| Expr1148845 | |||||||||
| Expr2002690 | |||||||||
| Expr2020906 | |||||||||
| Drives_construct | WBCnstr00032595 | ||||||||
| Construct_product | WBCnstr00032595 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | V | Position | 2.84254 | |||||
| Positive | Positive_clone | F17C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
