WormBase Tree Display for Gene: WBGene00008927
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| WBGene00008927 | SMap | S_parent | Sequence | F17H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | snx-17 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F17H10.3 | ||||||||
| Molecular_name | F17H10.3a | ||||||||
| F17H10.3a.1 | |||||||||
| CE31483 | |||||||||
| F17H10.3b | |||||||||
| CE40385 | |||||||||
| F17H10.3b.1 | |||||||||
| Other_name | CELE_F17H10.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | snx-17 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Feb 2012 09:59:39 | WBPerson2970 | Name_change | CGC_name | snx-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | snx | ||||||||
| Allele (98) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00009116 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable phosphatidylinositol binding activity. Predicted to be involved in intracellular protein transport. Predicted to be located in early endosome. Is an ortholog of human SNX17 (sorting nexin 17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F17H10.3a | |||||||
| F17H10.3b | |||||||||
| Corresponding_CDS_history | F17H10.3:wp83 | ||||||||
| Corresponding_transcript | F17H10.3a.1 | ||||||||
| F17H10.3b.1 | |||||||||
| Other_sequence | Hbac_isotig03344 | ||||||||
| HBC16640_1 | |||||||||
| EX010462.1 | |||||||||
| Associated_feature | WBsf654500 | ||||||||
| WBsf654501 | |||||||||
| WBsf654502 | |||||||||
| WBsf654503 | |||||||||
| WBsf982260 | |||||||||
| WBsf1007520 | |||||||||
| WBsf1007521 | |||||||||
| WBsf1024180 | |||||||||
| WBsf238102 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00097738 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00087652 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031086 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044903 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087628 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025455 | ||||||||
| Expr1033887 | |||||||||
| Expr1148874 | |||||||||
| Expr2015986 | |||||||||
| Expr2034221 | |||||||||
| Drives_construct | WBCnstr00032587 | ||||||||
| Construct_product | WBCnstr00032587 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction | WBInteraction000300316 | ||||||||
| WBInteraction000339349 | |||||||||
| WBInteraction000347083 | |||||||||
| WBInteraction000373654 | |||||||||
| WBInteraction000386877 | |||||||||
| WBInteraction000394855 | |||||||||
| WBInteraction000421343 | |||||||||
| Map_info | Map | X | Position | 10.2113 | |||||
| Positive | Positive_clone | F17H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031805 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061460 | |||||||||
| WBPaper00064057 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
