WormBase Tree Display for Gene: WBGene00008980
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| WBGene00008980 | SMap | S_parent | Sequence | F20D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | emre-1 | Person_evidence | WBPerson105 | |||||
| Sequence_name | F20D1.10 | ||||||||
| Molecular_name | F20D1.10 | ||||||||
| F20D1.10.1 | |||||||||
| CE23677 | |||||||||
| Other_name | tag-299 | ||||||||
| CELE_F20D1.10 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | emre-1 | ||||||||
| DB_info | Database | AceView | gene | XP599 | |||||
| WormQTL | gene | WBGene00008980 | |||||||
| WormFlux | gene | WBGene00008980 | |||||||
| NDB | locus_tag | CELE_F20D1.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008980|UniProtKB=Q9U3I4 | |||||||
| family | PTHR33904 | ||||||||
| NCBI | gene | 181594 | |||||||
| RefSeq | protein | NM_078086.7 | |||||||
| SwissProt | UniProtAcc | Q9U3I4 | |||||||
| TREEFAM | TREEFAM_ID | TF314649 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U3I4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-299 | ||||
| 3 | 05 Nov 2014 11:16:03 | WBPerson2970 | Name_change | CGC_name | emre-1 | ||||
| Other_name | tag-299 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | emre | ||||||||
| Allele (15) | |||||||||
| Strain | WBStrain00002501 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOPX130 | ||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Involved in mitochondrial calcium ion homeostasis and mitochondrial calcium ion transmembrane transport. Located in mitochondrion. Is an ortholog of human SMDT1 (single-pass membrane protein with aspartate rich tail 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20D1.10 | |||||||
| Corresponding_transcript | F20D1.10.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf034316 | ||||||||
| WBsf1008058 | |||||||||
| WBsf236743 | |||||||||
| WBsf236744 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031165 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045093 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5803 | ||||||||
| Expr9519 | |||||||||
| Expr1012730 | |||||||||
| Expr1033910 | |||||||||
| Expr1149043 | |||||||||
| Expr2011313 | |||||||||
| Expr2029549 | |||||||||
| Drives_construct | WBCnstr00003087 | ||||||||
| WBCnstr00037861 | |||||||||
| Construct_product | WBCnstr00014084 | ||||||||
| WBCnstr00037861 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (146) | |||||||||
| Map_info | Map | X | Position | 21.6164 | Error | 0.007322 | |||
| Positive | Positive_clone | F20D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5199 | |||||||
| 5052 | |||||||||
| 5568 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049784 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063976 | |||||||||
| WBPaper00064898 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
