WormBase Tree Display for Gene: WBGene00009196
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| WBGene00009196 | SMap | S_parent | Sequence | F28B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F28B1.2 | |||||||
| Molecular_name | F28B1.2 | ||||||||
| F28B1.2.1 | |||||||||
| CE52233 | |||||||||
| Other_name | CELE_F28B1.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F28B1.2 | ||||||||
| DB_info | Database | AceView | gene | 5R529 | |||||
| WormQTL | gene | WBGene00009196 | |||||||
| WormFlux | gene | WBGene00009196 | |||||||
| NDB | locus_tag | CELE_F28B1.2 | |||||||
| NCBI | gene | 180134 | |||||||
| RefSeq | protein | NM_001356778.3 | |||||||
| TREEFAM | TREEFAM_ID | TF343993 | |||||||
| TrEMBL | UniProtAcc | O45412 | |||||||
| UniProt_GCRP | UniProtAcc | O45412 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (214) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00039311 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00144905 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00140770 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| CSP26.g3184 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP40.g310 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_I.g2758 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_I.g2759 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold58.g341 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00069.g3254 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17348 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00007727 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00009195 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00045381 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00010129 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00009197 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00050973 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00007673 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012305 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in germ line and in male based on proteomic and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28B1.2 | |||||||
| Corresponding_CDS_history | F28B1.2:wp184 | ||||||||
| F28B1.2:wp261 | |||||||||
| Corresponding_transcript | F28B1.2.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00000264 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014022 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045776 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1149687 | ||||||||
| Expr2003085 | |||||||||
| Expr2021299 | |||||||||
| Drives_construct | WBCnstr00032380 | ||||||||
| Construct_product | WBCnstr00032380 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (54) | |||||||||
| Interaction (65) | |||||||||
| Map_info | Positive | Positive_clone | F28B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 12.3965 | |||||||
| Method | Gene |
