WormBase Tree Display for Gene: WBGene00009200
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| WBGene00009200 | SMap | S_parent | Sequence | F28C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F28C1.1 | |||||||
| Molecular_name | F28C1.1 | ||||||||
| F28C1.1.1 | |||||||||
| CE20729 | |||||||||
| Other_name | CELE_F28C1.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F28C1.1 | ||||||||
| DB_info | Database | AceView | gene | 5M933 | |||||
| WormQTL | gene | WBGene00009200 | |||||||
| WormFlux | gene | WBGene00009200 | |||||||
| NDB | locus_tag | CELE_F28C1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009200|UniProtKB=Q19854 | |||||||
| family | PTHR13161 | ||||||||
| NCBI | gene | 179705 | |||||||
| RefSeq | protein | NM_073723.4 | |||||||
| TREEFAM | TREEFAM_ID | TF351621 | |||||||
| TrEMBL | UniProtAcc | Q19854 | |||||||
| UniProt_GCRP | UniProtAcc | Q19854 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (80) | |||||||||
| Strain | WBStrain00037829 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00006359 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; neurons; and rectal epithelium based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; age-1; and hsf-1 based on microarray; RNA-seq; and proteomic studies. Is affected by eleven chemicals including D-glucose; bisphenol S; and Linolenic Acids based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Alternative splicing regulator; Phosphorylation site; Suppressor of white apricot, N-terminal domain; and Suppressor of white apricot. Is an ortholog of human CLASRP (CLK4 associating serine/arginine rich protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28C1.1 | |||||||
| Corresponding_transcript | F28C1.1.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf647376 | ||||||||
| WBsf661898 | |||||||||
| WBsf661899 | |||||||||
| WBsf1001584 | |||||||||
| WBsf232651 | |||||||||
| WBsf232652 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045798 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014032 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015051 | ||||||||
| Expr1034012 | |||||||||
| Expr1149710 | |||||||||
| Expr2003094 | |||||||||
| Expr2021308 | |||||||||
| Drives_construct | WBCnstr00032377 | ||||||||
| Construct_product | WBCnstr00032377 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Positive | Positive_clone | F28C1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 4.24703 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
