WormBase Tree Display for Gene: WBGene00009220
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| WBGene00009220 | SMap | S_parent | Sequence | CHROMOSOME_I | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | ||||||||
| Name | Sequence_name | F28D9.4 | ||||||||
| Molecular_name | F28D9.4 | |||||||||
| F28D9.4.1 | ||||||||||
| CE23687 | ||||||||||
| F28D9.4.2 | ||||||||||
| F28D9.4.3 | ||||||||||
| Other_name | CELE_F28D9.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | F28D9.4 | |||||||||
| DB_info | Database | WormQTL | gene | WBGene00009220 | ||||||
| WormFlux | gene | WBGene00009220 | ||||||||
| NDB | locus_tag | CELE_F28D9.4 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00009220|UniProtKB=D5MNM9 | ||||||||
| family | PTHR13141 | |||||||||
| NCBI | gene | 173012 | ||||||||
| RefSeq | protein | NM_001381218.2 | ||||||||
| TrEMBL | UniProtAcc | D5MNM9 | ||||||||
| UniProt_GCRP | UniProtAcc | D5MNM9 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 18 Nov 2005 13:41:52 | WBPerson1983 | Event | Acquires_merge | WBGene00013131 | |||||
| 3 | 30 Nov 2007 08:43:25 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| 4 | 11 Mar 2010 17:13:03 | WBPerson1983 | Event | Split_into | WBGene00013131 | |||||
| Acquires_merge | WBGene00013131 | |||||||||
| Split_into | WBGene00013131 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (154) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00007685 | |||||||||
| 00007686 | ||||||||||
| 00007687 | ||||||||||
| 00007688 | ||||||||||
| Contained_in_operon | CEOP1896 | |||||||||
| Ortholog (21) | ||||||||||
| Structured_description | Automated_description | Predicted to be located in mitochondrial inner membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | F28D9.4 | ||||||||
| Corresponding_CDS_history | F28D9.4:wp186 | |||||||||
| Corresponding_transcript | F28D9.4.1 | |||||||||
| F28D9.4.2 | ||||||||||
| F28D9.4.3 | ||||||||||
| Corresponding_pseudogene_history | F28D9.4a:wp213 | |||||||||
| F28D9.4b:wp213 | ||||||||||
| Other_sequence (23) | ||||||||||
| Associated_feature | WBsf985217 | |||||||||
| WBsf1010670 | ||||||||||
| Experimental_info | RNAi_result (16) | |||||||||
| Expr_pattern | Expr1034023 | |||||||||
| Expr1149744 | ||||||||||
| Expr2003106 | ||||||||||
| Expr2021320 | ||||||||||
| Microarray_results (18) | ||||||||||
| Expression_cluster (64) | ||||||||||
| Interaction (19) | ||||||||||
| Map_info | Positive | Positive_clone | F28D9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | I | 7.21999 | ||||||||
| Reference | WBPaper00061547 | |||||||||
| Remark | [100311 pad] This gene locus appears to have a novel polycistronic message that does not utilise SL2 trans splicing. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
