WormBase Tree Display for Gene: WBGene00009228
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| WBGene00009228 | SMap | S_parent | Sequence | F28G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F28G4.3 | |||||||
| Molecular_name | F28G4.3 | ||||||||
| F28G4.3.1 | |||||||||
| CE47702 | |||||||||
| Other_name | CELE_F28G4.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F28G4.3 | ||||||||
| DB_info | Database | AceView | gene | 5Q764 | |||||
| WormQTL | gene | WBGene00009228 | |||||||
| WormFlux | gene | WBGene00009228 | |||||||
| NDB | locus_tag | CELE_F28G4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009228|UniProtKB=O17853 | |||||||
| family | PTHR31389 | ||||||||
| NCBI | gene | 185081 | |||||||
| RefSeq | protein | NM_074711.5 | |||||||
| TREEFAM | TREEFAM_ID | TF320732 | |||||||
| TrEMBL | UniProtAcc | O17853 | |||||||
| UniProt_GCRP | UniProtAcc | O17853 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (73) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030845 | ||||||||
| Ortholog (64) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by several genes including sir-2.1; dpy-21; and smg-2 based on microarray and RNA-seq studies. Is affected by four chemicals including methylmercuric chloride; multi-walled carbon nanotube; and Colistin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1647); Protein of unknown function DUF1647; and Nucleotide-diphospho-sugar transferases. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28G4.3 | |||||||
| Corresponding_CDS_history | F28G4.3:wp232 | ||||||||
| Corresponding_transcript | F28G4.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00045862 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014070 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012767 | ||||||||
| Expr1149767 | |||||||||
| Drives_construct | WBCnstr00032357 | ||||||||
| Construct_product | WBCnstr00032357 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (40) | |||||||||
| Interaction (72) | |||||||||
| Map_info | Positive | Positive_clone | F28G4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 9.93377 | |||||||
| Reference | WBPaper00065080 | ||||||||
| Method | Gene |
