WormBase Tree Display for Gene: WBGene00009239
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| WBGene00009239 | SMap | S_parent | Sequence | F28H7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-6 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F28H7.6 | ||||||||
| Molecular_name | F28H7.6 | ||||||||
| F28H7.6.1 | |||||||||
| CE05755 | |||||||||
| Other_name | CELE_F28H7.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | irld-6 | ||||||||
| DB_info | Database | AceView | gene | 5L236 | |||||
| WormQTL | gene | WBGene00009239 | |||||||
| WormFlux | gene | WBGene00009239 | |||||||
| NDB | locus_tag | CELE_F28H7.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009239|UniProtKB=Q19893 | |||||||
| family | PTHR21662 | ||||||||
| NCBI | gene | 179491 | |||||||
| RefSeq | protein | NM_073344.6 | |||||||
| TrEMBL | UniProtAcc | Q19893 | |||||||
| UniProt_GCRP | UniProtAcc | Q19893 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irld | ||||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066245 | ||||||||
| 00105775 | |||||||||
| Ortholog (22) | |||||||||
| Paralog (66) | |||||||||
| Structured_description | Automated_description | Acts upstream of or within IRE1-mediated unfolded protein response. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28H7.6 | |||||||
| Corresponding_transcript | F28H7.6.1 | ||||||||
| Associated_feature | WBsf234438 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031555 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023217 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014085 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024016 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023448 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023729 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010386 | ||||||||
| Expr1149787 | |||||||||
| Expr2012864 | |||||||||
| Expr2031098 | |||||||||
| Drives_construct | WBCnstr00032348 | ||||||||
| Construct_product | WBCnstr00032348 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (161) | |||||||||
| Interaction | WBInteraction000115488 | ||||||||
| WBInteraction000357846 | |||||||||
| WBInteraction000368398 | |||||||||
| WBInteraction000503150 | |||||||||
| WBInteraction000504139 | |||||||||
| Map_info | Map | V | Position | 2.75582 | |||||
| Positive | Positive_clone | F28H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
