WormBase Tree Display for Gene: WBGene00009258
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| WBGene00009258 | SMap | S_parent | Sequence | F29G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ccdc-149 | Person_evidence | WBPerson2136 | |||||
| Sequence_name | F29G6.2 | ||||||||
| Molecular_name | F29G6.2 | ||||||||
| F29G6.2.1 | |||||||||
| CE09792 | |||||||||
| Other_name | CELE_F29G6.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ccdc-149 | ||||||||
| DB_info | Database | AceView | gene | XM128 | |||||
| WormQTL | gene | WBGene00009258 | |||||||
| WormFlux | gene | WBGene00009258 | |||||||
| NDB | locus_tag | CELE_F29G6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009258|UniProtKB=Q93635 | |||||||
| family | PTHR21682 | ||||||||
| NCBI | gene | 185121 | |||||||
| RefSeq | protein | NM_077520.3 | |||||||
| SwissProt | UniProtAcc | Q93635 | |||||||
| TREEFAM | TREEFAM_ID | TF319794 | |||||||
| UniProt_GCRP | UniProtAcc | Q93635 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 26 Apr 2016 12:10:59 | WBPerson2970 | Name_change | CGC_name | ccdc-149 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ccdc | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00036295 | ||||||||
| WBStrain00036300 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086311 | ||||||||
| 00086312 | |||||||||
| 00086313 | |||||||||
| 00086314 | |||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Located in ciliary base. Expressed in neurons. Is an ortholog of human CCDC149 (coiled-coil domain containing 149). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F29G6.2 | |||||||
| Corresponding_transcript | F29G6.2.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf654424 | ||||||||
| WBsf671038 | |||||||||
| WBsf671039 | |||||||||
| WBsf671040 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031585 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014113 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045937 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1942 | ||||||||
| Expr4855 | |||||||||
| Expr8198 | |||||||||
| Expr13191 | |||||||||
| Expr1013181 | |||||||||
| Expr1034037 | |||||||||
| Expr1149837 | |||||||||
| Expr2009755 | |||||||||
| Expr2027995 | |||||||||
| Drives_construct | WBCnstr00009856 | ||||||||
| WBCnstr00012283 | |||||||||
| WBCnstr00013173 | |||||||||
| WBCnstr00032336 | |||||||||
| Construct_product | WBCnstr00032336 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction | WBInteraction000030699 | ||||||||
| WBInteraction000193937 | |||||||||
| WBInteraction000200105 | |||||||||
| WBInteraction000340324 | |||||||||
| WBInteraction000362951 | |||||||||
| WBInteraction000467577 | |||||||||
| WBInteraction000546942 | |||||||||
| Map_info | Map | X | Position | 4.15546 | |||||
| Positive | Positive_clone | F29G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024163 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00046360 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
