WormBase Tree Display for Gene: WBGene00009360
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WBGene00009360 | SMap | S_parent | Sequence | F33E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F33E2.4 | |||||||
Molecular_name | F33E2.4 | ||||||||
F33E2.4.1 | |||||||||
CE50229 | |||||||||
F33E2.4.2 | |||||||||
F33E2.4.3 | |||||||||
Other_name | CELE_F33E2.4 | Accession_evidence | NDB | BX284601 | |||||
Public_name | F33E2.4 | ||||||||
DB_info | Database | AceView | gene | 1N175 | |||||
WormQTL | gene | WBGene00009360 | |||||||
WormFlux | gene | WBGene00009360 | |||||||
NDB | locus_tag | CELE_F33E2.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009360|UniProtKB=O01698 | |||||||
family | PTHR36517 | ||||||||
NCBI | gene | 185234 | |||||||
RefSeq | protein | NM_060788.5 | |||||||
TREEFAM | TREEFAM_ID | TF342747 | |||||||
TrEMBL | UniProtAcc | O01698 | |||||||
UniProt_GCRP | UniProtAcc | O01698 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (79) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (19) | |||||||||
Paralog | WBGene00008826 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00011921 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00044538 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015854 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00018822 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00077624 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00016770 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00044163 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00044162 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00284854 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in AVK and sensory neurons based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; multi-walled carbon nanotube; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF281) and Domain of unknown function DUF281. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F33E2.4 | |||||||
Corresponding_CDS_history | F33E2.4:wp101 | ||||||||
F33E2.4:wp245 | |||||||||
Corresponding_transcript | F33E2.4.1 | ||||||||
F33E2.4.2 | |||||||||
F33E2.4.3 | |||||||||
Associated_feature | WBsf979027 | ||||||||
WBsf985631 | |||||||||
Experimental_info | RNAi_result | WBRNAi00082313 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031722 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046217 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00003578 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028962 | ||||||||
Expr1150104 | |||||||||
Expr2003260 | |||||||||
Expr2021474 | |||||||||
Drives_construct | WBCnstr00032255 | ||||||||
Construct_product | WBCnstr00032255 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (111) | |||||||||
Interaction (13) | |||||||||
Map_info | Positive | Positive_clone | F33E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 13.6408 | |||||||
Method | Gene |